Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CCT8P1-201ENST00000413611 1657 ntBASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.39□□□□□ -1.87
RBFOX3A6NFN3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RNF6P1-201ENST00000444889 1784 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC007529.1-201ENST00000418574 2178 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 SNORA37-201ENST00000384504 129 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RNU6-244P-201ENST00000391028 104 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RNA5SP239-201ENST00000410218 129 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RNU6-564P-201ENST00000410983 104 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 CHEK2P3-201ENST00000416118 248 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC115285.1-201ENST00000424879 736 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC006455.6-201ENST00000426192 893 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RPS12P10-201ENST00000427031 377 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AL606490.7-201ENST00000433136 191 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC023512.1-201ENST00000444513 499 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RPL23AP72-201ENST00000492447 435 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC106872.2-201ENST00000494303 480 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC004980.4-201ENST00000513375 203 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC013701.1-201ENST00000522657 465 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MORF4L1P3-201ENST00000525966 950 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC007424.1-203ENST00000554613 687 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MIR4443-201ENST00000585052 53 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC093765.1-201ENST00000603758 881 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AL355816.1-201ENST00000607951 118 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MIR7155-201ENST00000615925 56 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC090510.2-201ENST00000617465 629 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC095038.2-201ENST00000621464 1070 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MIR6730-201ENST00000622213 67 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC006065.6-201ENST00000625201 545 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 U3.53-201ENST00000628922 216 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 AC131971.1-201ENST00000332881 1482 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RBFOX3A6NFN3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL136964.1-201ENST00000622038 2990 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AC103591.2-201ENST00000265259 766 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RNU4-23P-201ENST00000362839 140 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 RNU4-4P-201ENST00000364588 130 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL645927.1-201ENST00000396783 406 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 SDHCP2-201ENST00000398565 501 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 Z98941.1-201ENST00000407764 100 ntBASIC3.37□□□□□ -1.87
RBFOX3A6NFN3 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms