Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 MTCO2P22-201ENST00000603246 681 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC008745.1-201ENST00000604064 271 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC078880.5-201ENST00000617845 421 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL359757.1-201ENST00000623176 255 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AL132640.2-201ENST00000559968 1698 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 AC008432.1-201ENST00000615912 1320 ntBASIC4.95□□□□□ -1.62
SNX9Q9Y5X1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL391684.1-202ENST00000641293 1636 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 KARSP3-201ENST00000571212 1504 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL592291.1-201ENST00000403830 352 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 HMGB3P19-201ENST00000403971 560 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC004690.1-201ENST00000418216 328 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 CACYBPP1-201ENST00000438592 684 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 RPL7P55-201ENST00000450522 746 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC006463.2-201ENST00000473326 348 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AK3P4-201ENST00000504283 583 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC118942.1-201ENST00000529674 1035 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC021483.2-201ENST00000567415 758 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC069061.3-201ENST00000582254 823 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC093765.1-201ENST00000603758 881 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL078595.3-201ENST00000623815 1166 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AL049536.1-201ENST00000625043 744 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC135352.1-201ENST00000506173 1418 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 AC104118.1-201ENST00000607625 1589 ntBASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
SNX9Q9Y5X1 LINC01109-201ENST00000603837 3081 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RNU5E-10P-201ENST00000363506 118 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RNU6-481P-201ENST00000384194 107 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RNU6-1005P-201ENST00000384519 107 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL512430.2-201ENST00000406786 339 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL445183.3-201ENST00000414168 502 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 UQCRBP1-201ENST00000421129 336 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 RPL36AP10-201ENST00000421785 322 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 CENPIP1-201ENST00000425713 902 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 AL353597.2-202ENST00000434901 373 ntBASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.93□□□□□ -1.62
SNX9Q9Y5X1 YWHAZP2-201ENST00000440317 728 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms