Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC139769.1-204ENST00000472297 1931 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 EOGT-210ENST00000615922 1931 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC125257.1-201ENST00000560400 2930 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL132640.2-201ENST00000559968 1698 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 Y_RNA.110-201ENST00000363220 99 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 TATDN1P1-201ENST00000414123 891 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC004690.1-201ENST00000418216 328 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AP001324.1-201ENST00000428553 399 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC073069.1-201ENST00000428657 441 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL353093.1-201ENST00000441292 436 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 HMGB3P9-201ENST00000441799 583 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RPL23AP43-201ENST00000446445 471 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC111193.1-201ENST00000504097 155 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC002456.2-201ENST00000509356 380 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 SNORD116-26-201ENST00000516006 96 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RN7SKP92-201ENST00000517266 244 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 HIGD1AP5-201ENST00000529959 259 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 CYCSP28-201ENST00000534284 321 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 OSBPL9P3-201ENST00000534523 595 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC027455.1-201ENST00000574104 594 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RN7SL176P-201ENST00000580352 264 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC090181.2-201ENST00000602975 672 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC018618.2-201ENST00000604770 446 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL355816.1-201ENST00000607951 118 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC131238.1-201ENST00000617135 328 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC140113.4-201ENST00000622087 222 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AC091905.2-201ENST00000623143 306 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL049536.1-201ENST00000625043 744 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 OR2L1P-202ENST00000641567 1023 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
ATG4BQ9Y4P1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 RNU6-252P-201ENST00000363232 107 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 RNU1-32P-201ENST00000363937 159 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 RNU1-63P-201ENST00000383902 164 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 MIR195-201ENST00000385194 87 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 TCEA1P4-201ENST00000415066 844 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 UQCRBP1-201ENST00000421129 336 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL121882.1-201ENST00000422893 417 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 FO393419.3-201ENST00000428741 282 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ELOCP3-201ENST00000439303 348 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AL162591.2-201ENST00000449634 317 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC239809.1-201ENST00000450470 217 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC012671.1-201ENST00000451912 203 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 OR52A4P-201ENST00000472867 958 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AK3P4-201ENST00000504283 583 ntBASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ATG4BQ9Y4P1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms