Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 FAM106CP-201ENST00000582212 507 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 MIR5096-201ENST00000583713 70 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AL160290.3-201ENST00000604869 165 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AL356218.2-201ENST00000605264 187 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AL021997.2-201ENST00000615674 271 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC010435.1-201ENST00000623353 1177 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 HSPD1P11-201ENST00000508643 1702 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC008033.1-201ENST00000216407 1162 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC011155.1-201ENST00000316512 456 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 RNA5SP447-201ENST00000363749 119 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 RNA5SP175-201ENST00000364275 119 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL603766.1-201ENST00000407763 664 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL356806.1-201ENST00000422524 916 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 DNAJC19P7-201ENST00000428811 344 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 MTCO1P57-201ENST00000432182 261 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL512326.1-201ENST00000443050 721 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 PHBP16-201ENST00000446318 950 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 OR5BC1P-201ENST00000529327 739 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL352979.3-201ENST00000553515 247 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 HMGB3P26-201ENST00000560051 582 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 MTND2P13-201ENST00000577438 1039 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 MIR4700-201ENST00000578311 74 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AL139286.1-201ENST00000604465 483 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC113403.1-201ENST00000604910 193 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC007620.3-201ENST00000608131 497 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 RMST_5.1-201ENST00000618704 126 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC015722.2-201ENST00000622210 551 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 AC019278.1-201ENST00000623516 479 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 BMS1P21-201ENST00000634565 365 ntBASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TRAPPC4Q9Y296 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 EIF2AP4-201ENST00000424793 1781 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC090017.1-201ENST00000548612 1779 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC010132.2-201ENST00000295493 1043 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 MIR331-201ENST00000362302 94 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RNU6-1251P-201ENST00000364502 107 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RNA5SP105-201ENST00000391123 113 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 NPM1P10-201ENST00000398310 865 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL138878.1-201ENST00000405131 347 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL136131.1-201ENST00000406079 803 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC099336.2-201ENST00000422457 254 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC009480.2-201ENST00000422916 432 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RPS29P17-201ENST00000430795 166 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL353597.2-202ENST00000434901 373 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 FTH1P16-201ENST00000435241 552 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 ARL5AP3-201ENST00000439327 386 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL356535.1-201ENST00000440335 398 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 TPTE2P3-201ENST00000441562 1189 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 RPL7P32-201ENST00000457119 744 ntBASIC3.91□□□□□ -1.78
TRAPPC4Q9Y296 AC099560.2-201ENST00000457554 255 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms