Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC130360.1-201ENST00000425489 1117 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 MTND6P18-201ENST00000439477 513 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 RN7SL369P-201ENST00000477138 299 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 snoZ278.1-201ENST00000517059 112 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 LY96-202ENST00000518893 430 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC130365.2-201ENST00000525882 1201 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 SCOCP1-201ENST00000554676 349 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 DPPA3P3-201ENST00000603842 430 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 STMN1P1-201ENST00000617809 440 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC245014.3-201ENST00000618589 347 ntBASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8□□□□□ -1.13
PDZRN3Q9UPQ7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AL662795.2-201ENST00000624252 3706 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.31-201ENST00000362574 102 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.387-201ENST00000383918 102 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 CYCSP45-201ENST00000402289 315 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 MTATP8P1-201ENST00000467115 207 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 NDUFB4P2-201ENST00000509515 391 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC005741.1-201ENST00000511094 432 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC026412.2-201ENST00000512270 1075 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 OR5M7P-201ENST00000526140 972 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC010200.2-201ENST00000605098 235 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC005084.1-201ENST00000605160 304 ntBASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PDZRN3Q9UPQ7 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AC008627.1-201ENST00000517511 1704 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AP005901.5-201ENST00000545779 1796 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 RNA5SP350-201ENST00000363298 111 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 Y_RNA.395-201ENST00000383945 109 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 MIR130B-202ENST00000385018 82 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 SNORD65C-201ENST00000390962 71 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 TXNP7-201ENST00000406296 293 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 RNA5SP251-201ENST00000410614 137 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 NPM1P40-201ENST00000412758 733 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 RPS27AP14-201ENST00000422868 454 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AL157884.1-201ENST00000424561 454 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 YWHAEP1-201ENST00000453697 763 ntBASIC7.98□□□□□ -1.13
PDZRN3Q9UPQ7 HLA-DPA3-207ENST00000454398 229 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms