Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 VN1R85P-201ENST00000601587 426 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AL023881.1-201ENST00000621088 301 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 AC034229.5-201ENST00000624258 185 ntBASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CTNNA3Q9UI47 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 RNA5SP515-201ENST00000364570 118 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 RNA5SP513-201ENST00000364648 118 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 SNORD66.1-201ENST00000391230 76 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 OR6C69P-201ENST00000394268 893 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 VN1R8P-201ENST00000407739 893 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 RNU6-603P-201ENST00000411403 107 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 RPL23AP81-201ENST00000455252 467 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 RPS20P4-201ENST00000461659 355 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 PPBPP1-201ENST00000510807 373 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 SNORD116-30-201ENST00000516468 85 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC006064.5-201ENST00000541782 248 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 CCDC58P3-201ENST00000590792 430 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AL121890.3-201ENST00000618494 516 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 AC007546.1-201ENST00000619452 559 ntBASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
CTNNA3Q9UI47 CASC19-284ENST00000642142 1868 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC067945.1-201ENST00000342609 618 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 RNA5SP104-201ENST00000410989 118 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC011933.1-201ENST00000413334 321 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL161631.1-201ENST00000417933 486 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 MTCYBP7-201ENST00000419540 1134 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 OR6K4P-201ENST00000423179 955 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL157831.1-201ENST00000426134 473 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 CBX1P1-201ENST00000440184 427 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 SERPINA7P1-201ENST00000443077 631 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC104306.1-201ENST00000449702 371 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 FGF7P3-201ENST00000454645 303 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC116533.1-201ENST00000459748 321 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL592156.1-201ENST00000508758 304 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 MTCO1P35-201ENST00000515270 228 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 RNU6-319P-201ENST00000516025 108 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 RNA5SP73-201ENST00000516744 108 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC087888.1-201ENST00000550884 1254 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL354984.3-201ENST00000604803 325 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 NOL8P1-201ENST00000508336 3529 ntBASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
CTNNA3Q9UI47 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 AC074029.4-201ENST00000624796 1859 ntBASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 SNORA70C-201ENST00000384538 135 ntBASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 ATP5F1P2-201ENST00000398143 760 ntBASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 AL034374.1-201ENST00000406329 351 ntBASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.12□□□□□ -1.59
CTNNA3Q9UI47 CACYBPP1-201ENST00000438592 684 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms