Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 FP325313.1-201ENST00000638228 703 ntBASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLIP2Q9UDT6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLIP2Q9UDT6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.09□□□□□ -1.6
CLIP2Q9UDT6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RNA5SP307-201ENST00000362863 116 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RN7SKP227-201ENST00000364445 330 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 SNORA70C-201ENST00000384538 135 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AL161909.1-201ENST00000397390 712 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RPL6P29-201ENST00000414863 865 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC007064.3-201ENST00000422608 359 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AL353597.2-202ENST00000434901 373 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 CASP3P1-201ENST00000446037 609 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RPL31P20-201ENST00000449593 360 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 VN1R32P-201ENST00000452234 905 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RPL35P6-201ENST00000490024 372 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RN7SL691P-201ENST00000494487 301 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 OR52A4P-203ENST00000498233 1014 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC008958.1-201ENST00000511047 682 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 RNU6-551P-201ENST00000516661 103 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC069240.1-201ENST00000548774 375 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 TVP23BP1-201ENST00000557500 617 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC010201.1-201ENST00000605051 540 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 Z98200.1-201ENST00000607298 470 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC092653.1-201ENST00000608509 531 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AL356274.1-201ENST00000617064 410 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AC007546.2-201ENST00000623996 360 ntBASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CLIP2Q9UDT6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC068254.2-201ENST00000623938 3577 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AL133243.3-201ENST00000617415 3004 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 HSPD1P11-201ENST00000508643 1702 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 MIR383-201ENST00000362257 73 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RNA5SP36-201ENST00000410197 133 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RPL23AP38-201ENST00000423801 469 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AL157831.1-201ENST00000426134 473 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RPS27AP12-201ENST00000429552 465 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RPEP2-201ENST00000432149 701 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AL512326.1-201ENST00000443050 721 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 EIF4A1P11-201ENST00000451239 222 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 FGF7P3-201ENST00000454645 303 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RPL7P22-201ENST00000466005 733 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 RPL7P19-201ENST00000469948 618 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC090819.1-201ENST00000523800 1111 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC023043.4-201ENST00000612081 449 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 AC010329.2-201ENST00000595195 2737 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 MTCO1P8-201ENST00000416914 1523 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 BX005019.1-201ENST00000561881 1810 ntBASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLIP2Q9UDT6 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CLIP2Q9UDT6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms