Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 BX119904.4-201ENST00000424402 301 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 PRPF38AP2-201ENST00000438179 851 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL034418.1-201ENST00000448675 860 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL109741.2-201ENST00000455561 343 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 RN7SL189P-201ENST00000468631 289 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 GAPDHP36-201ENST00000480688 918 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 RPL7P41-201ENST00000485823 957 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 DYNLL1P6-201ENST00000503440 264 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 XKRY-201ENST00000510392 1100 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC079395.1-201ENST00000510981 262 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC087808.1-201ENST00000520501 361 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC021006.3-201ENST00000530771 192 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC005832.3-201ENST00000537929 631 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC009117.1-201ENST00000563948 554 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 NBR2-204ENST00000587322 63 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC108738.1-201ENST00000603703 237 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 MEMO1P5-201ENST00000604810 406 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC079248.2-201ENST00000623779 326 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 ATE1-AS1-202ENST00000636460 506 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC073869.7-201ENST00000640874 297 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 MTCO1P7-201ENST00000419523 1542 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AL049737.1-201ENST00000413920 1403 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 TCP11X1-202ENST00000622971 1372 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AL512646.1-201ENST00000269395 1077 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 OR9G4-201ENST00000302957 984 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 RNU6-304P-201ENST00000364855 107 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 CYB5AP4-201ENST00000396692 399 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 GSTM3P2-201ENST00000412746 530 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 RFC5P1-201ENST00000454419 874 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 IGBP1P4-201ENST00000503202 879 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 HMGB1P23-201ENST00000518743 568 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC136777.2-201ENST00000522979 358 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 OR8Q1P-201ENST00000526467 655 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC137768.1-201ENST00000549998 553 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC084824.1-201ENST00000550917 1005 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC063949.1-201ENST00000552900 865 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 MTCYBP33-201ENST00000575007 1130 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AL592221.1-201ENST00000605266 382 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.81□□□□□ -1.48
VTA1Q9NP79 AC004943.3-201ENST00000624116 600 ntBASIC5.81□□□□□ -1.48
VTA1Q9NP79 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VTA1Q9NP79 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms