Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC023512.1-201ENST00000444513 499 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AL627224.1-201ENST00000448334 444 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 NUTF2P3-201ENST00000448540 384 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC116533.1-201ENST00000459748 321 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC093824.1-201ENST00000508796 343 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 MTCO1P35-201ENST00000515270 228 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC084824.1-201ENST00000550917 1005 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 COX6CP4-201ENST00000605798 228 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC023043.4-201ENST00000612081 449 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC007342.8-201ENST00000623278 678 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 AC135352.1-201ENST00000506173 1418 ntBASIC4.52□□□□□ -1.69
TM9SF3Q9HD45 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 SNORA70C-201ENST00000384538 135 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 MIR195-201ENST00000385194 87 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL160275.2-201ENST00000412010 394 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 RAD23BP1-201ENST00000421404 1227 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 RPL30P3-201ENST00000424262 333 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 RPS12P10-201ENST00000427031 377 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AP001324.1-201ENST00000428553 399 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL031663.1-201ENST00000437445 219 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC104651.2-201ENST00000447549 528 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL645939.1-201ENST00000453429 797 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 RPL7P32-201ENST00000457119 744 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 HMGB3P13-201ENST00000511263 607 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 SNORA31.9-201ENST00000516429 84 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 RNU6-1308P-201ENST00000516817 103 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 CYCSP29-201ENST00000533731 318 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 PSMB7P1-201ENST00000556349 514 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 MIR1254-2-201ENST00000579553 63 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 NF1P5-201ENST00000588287 448 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 IPO5P1-202ENST00000600039 287 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC067959.1-201ENST00000604334 379 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL109618.2-201ENST00000605527 211 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL445567.2-201ENST00000618935 498 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 OR2L1P-202ENST00000641567 1023 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 LINC01808-202ENST00000641680 1116 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 AL139811.1-201ENST00000424779 2299 ntBASIC4.51□□□□□ -1.69
TM9SF3Q9HD45 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC017104.4-201ENST00000636283 1592 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 RNU1-108P-201ENST00000362556 161 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 HDGFP1-201ENST00000405943 252 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AMZ2P2-201ENST00000406819 1057 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 RN7SKP27-201ENST00000410684 333 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AL355994.1-201ENST00000424379 260 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 ACTR3P2-201ENST00000439585 1257 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 PHBP16-201ENST00000446318 950 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 RN7SL98P-201ENST00000462271 300 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC007537.2-201ENST00000472093 511 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 MYL12AP1-201ENST00000518490 515 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 MRPL49P2-201ENST00000521066 465 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AP001160.4-201ENST00000596971 382 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC026979.4-201ENST00000606555 645 ntBASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.5□□□□□ -1.69
TM9SF3Q9HD45 AC055839.1-201ENST00000634467 498 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms