Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 AL606834.3-201ENST00000602615 496 ntBASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 AL512782.1-201ENST00000603093 364 ntBASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 AC023509.5-201ENST00000617434 807 ntBASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.85□□□□□ -1.63
POLR1BQ9H9Y6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC092162.3-201ENST00000624511 1624 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC126755.2-208ENST00000327792 462 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC138969.1-213ENST00000331436 462 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPL32P3-201ENST00000359025 275 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RNU4-44P-201ENST00000363050 141 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 SNORA72.3-201ENST00000365074 132 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR525-201ENST00000384978 85 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR589-201ENST00000385238 99 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR92A2-201ENST00000385299 75 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPS3AP23-201ENST00000401762 784 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPL7P27-201ENST00000403775 720 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 NPM1P24-201ENST00000428039 894 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 TVP23BP2-201ENST00000455082 615 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 snoU13.1-201ENST00000459157 104 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPS23P7-201ENST00000466210 444 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPL23AP71-201ENST00000470966 469 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC011005.3-201ENST00000491624 395 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC093720.1-201ENST00000505681 714 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 PRELID3BP4-201ENST00000515476 571 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MORF4L1P3-201ENST00000525966 950 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC090751.1-201ENST00000566966 267 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MTND4LP24-201ENST00000572277 291 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AL355816.1-201ENST00000607951 118 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 MIR6758-201ENST00000620653 63 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 AC023510.2-201ENST00000622162 746 ntBASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.63
POLR1BQ9H9Y6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
POLR1BQ9H9Y6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
POLR1BQ9H9Y6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.84□□□□□ -1.64
POLR1BQ9H9Y6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 SALL4P2-201ENST00000423288 2910 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 SNORA70.2-201ENST00000364506 135 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 RNU6-178P-201ENST00000384631 104 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 P2RY10P2-201ENST00000416730 913 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 AC013429.2-201ENST00000418798 781 ntBASIC4.83□□□□□ -1.64
POLR1BQ9H9Y6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms