Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 RNU6-249P-201ENST00000363016 102 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SNORA62-201ENST00000365493 153 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 RNU6-468P-201ENST00000384003 109 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 RNU6-906P-201ENST00000384700 70 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SNORD116-4-201ENST00000384733 96 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SNORD65-201ENST00000391079 73 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC119751.3-201ENST00000399720 670 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 QRSL1P2-201ENST00000418582 964 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC090960.1-201ENST00000421072 306 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 MTCO3P30-201ENST00000426425 670 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 MTCYBP29-201ENST00000436327 1006 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 CR769776.1-201ENST00000441254 787 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 TPT1P12-201ENST00000448968 492 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 CYCSP20-201ENST00000473154 315 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 DUXAP6-201ENST00000553858 601 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC007599.1-201ENST00000568688 1174 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 RPL26P30-202ENST00000602923 645 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC084373.1-201ENST00000603311 235 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC025175.1-201ENST00000606482 759 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC005021.1-201ENST00000608730 355 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 FAM27B-201ENST00000610601 213 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC021106.3-201ENST00000623925 531 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 CR381572.2-201ENST00000624852 397 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 AC092111.2-201ENST00000611627 1414 ntBASIC5.03□□□□□ -1.6
EBF3Q9H4W6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.03□□□□□ -1.6
EBF3Q9H4W6 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RPL32P3-201ENST00000359025 275 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC234772.1-201ENST00000377927 937 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 U3.30-201ENST00000391308 210 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RPS3AP23-201ENST00000401762 784 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AL138880.1-201ENST00000405824 642 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 Y_RNA.599-201ENST00000410489 109 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC114755.2-201ENST00000413520 361 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 TATDN1P1-201ENST00000414123 891 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 UBE2V1P9-201ENST00000414760 368 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 P2RY10P2-201ENST00000416730 913 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 GLUD1P9-201ENST00000420997 1173 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 USP9YP11-201ENST00000427537 717 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 BX119904.1-201ENST00000432026 348 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RPL35AP21-201ENST00000437667 333 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 MTND6P5-201ENST00000448266 512 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 CYCSP42-201ENST00000450823 238 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 MTCO3P16-201ENST00000454456 754 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 RN7SL385P-201ENST00000468873 276 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 OR5H3P-201ENST00000502817 919 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 PRELID3BP7-201ENST00000503606 469 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC021087.2-201ENST00000504656 1203 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC118282.2-201ENST00000508739 374 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 ENPP7P9-201ENST00000514456 627 ntBASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.02□□□□□ -1.61
EBF3Q9H4W6 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms