Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 OR4C10P-201ENST00000434991 931 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 ELOCP8-201ENST00000439309 332 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 ELOCP15-201ENST00000442090 332 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 RN7SL132P-201ENST00000478131 296 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC092045.1-201ENST00000495716 1231 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 OR8G5-201ENST00000524943 1041 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 UBTFL9-201ENST00000534504 1148 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 CBX3P5-201ENST00000552017 521 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 MIR4644-201ENST00000579929 84 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 HMGB1P50-201ENST00000605814 607 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC114781.5-201ENST00000615297 108 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 MTND5P23-201ENST00000430812 1655 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 FAM35DP-201ENST00000323387 2712 ntBASIC4.4□□□□□ -1.71
TRIM4Q9C037 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
TRIM4Q9C037 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRIM4Q9C037 AC135352.1-201ENST00000506173 1418 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 SNORD46.1-201ENST00000364139 104 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM4Q9C037 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 RPS26P8-201ENST00000393490 348 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 AMZ2P2-201ENST00000406819 1057 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 RNU6-628P-201ENST00000410675 107 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 RCC2P2-201ENST00000422174 918 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 RPL21P43-201ENST00000425440 472 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 RPL7P4-203ENST00000430239 730 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 EXTL2P1-201ENST00000446218 416 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 RFPL4AP3-201ENST00000515267 345 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 RNU1-6P-201ENST00000516290 144 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 AGGF1P6-201ENST00000569213 976 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 IPO5P1-202ENST00000600039 287 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 AC100847.1-201ENST00000611316 481 ntBASIC4.39□□□□□ -1.71
TRIM4Q9C037 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.39□□□□□ -1.71
TRIM4Q9C037 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM4Q9C037 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TRIM4Q9C037 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM4Q9C037 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 RNA5SP22-201ENST00000365393 109 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC007068.1-201ENST00000396690 844 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 NCSTNP1-201ENST00000406229 144 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 RN7SKP202-201ENST00000410439 330 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC008280.1-201ENST00000418851 412 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC073335.1-201ENST00000427776 363 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC104849.1-201ENST00000462623 405 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 RPL36AP41-201ENST00000493820 306 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC025164.1-201ENST00000496249 478 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AL360157.1-201ENST00000565962 87 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC073091.2-201ENST00000603205 907 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC073137.1-201ENST00000605636 634 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AC243756.2-201ENST00000618406 463 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AL035461.2-201ENST00000619201 524 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 AP000843.1-201ENST00000624880 701 ntBASIC4.38□□□□□ -1.71
TRIM4Q9C037 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM4Q9C037 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM4Q9C037 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
TRIM4Q9C037 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM4Q9C037 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM4Q9C037 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM4Q9C037 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms