Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL352979.3-201ENST00000553515 247 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 PRELID3BP8-201ENST00000604148 295 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 AC091488.1-201ENST00000604239 660 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 SUGT1P3-202ENST00000604259 383 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 U6.107-201ENST00000637108 79 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 AC022325.1-201ENST00000502748 2199 ntBASIC5.09□□□□□ -1.59
SSBP3Q9BWW4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 AL137141.1-201ENST00000624622 4836 ntBASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 AC008627.1-201ENST00000517511 1704 ntBASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.09□□□□□ -1.6
SSBP3Q9BWW4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 CCT4P2-201ENST00000233836 1548 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 MTCO1P11-201ENST00000429111 1528 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC107982.1-201ENST00000507171 1300 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 FRG1BP-201ENST00000278882 761 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 FRG1CP-201ENST00000358464 769 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.72-201ENST00000362894 103 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 Y_RNA.409-201ENST00000383990 98 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RPS24P12-201ENST00000402084 394 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RPL23AP47-201ENST00000408017 460 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AMD1P2-201ENST00000412936 992 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC245096.1-201ENST00000413104 546 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL358934.1-201ENST00000432346 324 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL138787.1-202ENST00000437804 898 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RPL12P11-201ENST00000439970 501 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 FTLP8-201ENST00000446770 267 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 CFL1P4-201ENST00000451536 498 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC087312.1-201ENST00000471411 480 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC092865.4-201ENST00000477936 615 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC096576.1-201ENST00000489014 359 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 KCTD9P5-201ENST00000504141 1170 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RNA5SP434-201ENST00000516647 121 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC022878.1-201ENST00000530684 149 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC007956.1-201ENST00000555623 542 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RPA2P1-201ENST00000556557 721 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 DPPA3P2-202ENST00000557188 1219 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 MIR3189-201ENST00000578735 73 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 MIR4310-201ENST00000582950 57 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 NPIPB1P-202ENST00000588786 828 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC011712.1-201ENST00000588959 234 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC068768.2-201ENST00000602352 343 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC024884.1-201ENST00000620583 399 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AL137067.2-201ENST00000621202 131 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC073488.3-201ENST00000631611 778 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC093297.3-201ENST00000607056 2517 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 AC024587.1-201ENST00000505925 2157 ntBASIC5.08□□□□□ -1.6
SSBP3Q9BWW4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms