Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AL590763.1-201ENST00000398297 1545 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC134882.1-201ENST00000603738 1676 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 RNA5SP191-201ENST00000362585 102 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 RNA5SP123-201ENST00000363244 119 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 RNU1-87P-201ENST00000363727 170 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 RHEBP3-201ENST00000411920 351 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MORF4L1P7-201ENST00000426038 703 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 USP12PY-201ENST00000427677 1064 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC005154.2-201ENST00000438110 379 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 ELOCP3-201ENST00000439303 348 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AL356535.1-201ENST00000440335 398 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AL158053.1-201ENST00000441503 453 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC021087.2-201ENST00000504656 1203 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC093763.2-201ENST00000505334 1223 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC034244.2-201ENST00000514668 858 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MTCO3P22-201ENST00000603219 784 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC245389.2-201ENST00000616023 576 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC242843.1-201ENST00000618702 573 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MIR6891-201ENST00000618788 93 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 AC097460.3-201ENST00000623099 442 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 BX005019.1-201ENST00000561881 1810 ntBASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC28BQ9BUN5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RNA5SP105-201ENST00000391123 113 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RN7SKP100-201ENST00000411258 284 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RPS12P10-201ENST00000427031 377 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 HSFY7P-201ENST00000432672 318 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RPL12P46-201ENST00000436610 195 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 HSFY8P-201ENST00000437934 318 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 YWHAZP2-201ENST00000440317 728 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RPL23AP93-201ENST00000440847 484 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 YWHAQP9-201ENST00000445891 512 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 HSFY5P-201ENST00000453726 309 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 snoU13.20-201ENST00000459180 104 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC108729.2-201ENST00000476543 840 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 MTCO1P31-201ENST00000506355 492 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RPL7L1P4-201ENST00000513004 707 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC113192.3-201ENST00000529152 742 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 RFPL1S-203ENST00000539579 330 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 HAUS8P1-201ENST00000549005 542 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL352979.3-201ENST00000553515 247 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC007225.2-201ENST00000562529 256 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC005776.1-201ENST00000603164 290 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL133338.2-201ENST00000604292 736 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC024933.1-201ENST00000608472 348 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AL163051.2-201ENST00000618976 735 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 MIR6853-201ENST00000619642 74 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC138907.10-201ENST00000623708 983 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 OR2L1P-202ENST00000641567 1023 ntBASIC4.26□□□□□ -1.73
CCDC28BQ9BUN5 LINC01808-202ENST00000641680 1116 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms