Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 Y_RNA.302-201ENST00000364997 102 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK1Q99986 RNU6-444P-201ENST00000383988 108 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
VRK1Q99986 PRELID3BP11-201ENST00000414230 479 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 MTCO3P41-201ENST00000414801 328 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.08□□□□□ -1.6
VRK1Q99986 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC006366.1-201ENST00000422002 759 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK1Q99986 NIPA2P1-201ENST00000426223 976 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 HMGN2P27-201ENST00000427352 270 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 NPM1P18-201ENST00000434232 732 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 AL445665.1-202ENST00000452436 324 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 KATNBL1P6-201ENST00000453433 915 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 YWHAEP1-201ENST00000453697 763 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC104164.1-201ENST00000460282 590 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC116337.2-201ENST00000477662 156 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC013828.1-201ENST00000481845 158 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC099521.1-201ENST00000482557 334 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC106872.4-201ENST00000510050 523 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK1Q99986 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC090515.3-201ENST00000560431 315 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.08□□□□□ -1.6
VRK1Q99986 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 COX6CP7-201ENST00000597056 208 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC011445.2-201ENST00000599274 173 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC027243.2-201ENST00000602530 724 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC116651.1-201ENST00000609724 556 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.08□□□□□ -1.6
VRK1Q99986 AC026585.1-201ENST00000619582 524 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC018816.2-201ENST00000621460 353 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 AC009878.1-201ENST00000621819 340 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.08□□□□□ -1.6
VRK1Q99986 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK1Q99986 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VRK1Q99986 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VRK1Q99986 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 THAP12P9-201ENST00000503971 2360 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 PDZK1P1-202ENST00000425209 1350 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VRK1Q99986 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.07□□□□□ -1.6
VRK1Q99986 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 SELENOWP1-201ENST00000322792 252 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 U3.4-201ENST00000363352 213 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VRK1Q99986 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 FABP12P1-201ENST00000401911 322 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AL078604.1-201ENST00000404609 466 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RPS3AP2-201ENST00000407190 754 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RN7SKP206-201ENST00000410823 293 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RPL35AP3-201ENST00000414680 288 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 RPL7P56-201ENST00000429441 717 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 UBE2FP3-201ENST00000436366 524 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 RPL36AP33-201ENST00000450395 310 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 OR6C5P-201ENST00000452388 923 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 GEMIN2P1-201ENST00000454246 752 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 UBFD1P1-201ENST00000473259 814 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC006499.5-201ENST00000505037 514 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.07□□□□□ -1.6
VRK1Q99986 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC091965.2-201ENST00000512324 613 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 RNU6-583P-201ENST00000516012 92 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 SNORA70.20-201ENST00000516848 126 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC008802.1-201ENST00000519121 791 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.07□□□□□ -1.6
VRK1Q99986 AC239860.2-201ENST00000525886 270 ntBASIC5.07□□□□□ -1.6
VRK1Q99986 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.07□□□□□ -1.6
VRK1Q99986 OR5M2P-201ENST00000529003 936 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms