Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 TPT1P12-201ENST00000448968 492 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 RPS23P7-201ENST00000466210 444 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC010374.1-201ENST00000503762 1237 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 STMN1P2-201ENST00000508435 439 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC108471.1-201ENST00000513977 287 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 TRAV8-5-201ENST00000537369 341 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 RPL21P7-201ENST00000557463 483 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 RPL23AP97-201ENST00000568955 471 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 IPO5P1-202ENST00000600039 287 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC090953.1-201ENST00000604305 1092 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AL354984.3-201ENST00000604803 325 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC078899.5-201ENST00000612475 178 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AL353726.1-201ENST00000614041 1000 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 RMST_9.1-201ENST00000619945 193 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 AC145207.9-201ENST00000623802 325 ntBASIC4.47□□□□□ -1.69
RPRD1AQ96P16 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.47□□□□□ -1.69
RPRD1AQ96P16 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
RPRD1AQ96P16 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AL583835.1-201ENST00000399570 407 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 DHFRP5-201ENST00000406944 564 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 MIR1911-201ENST00000410783 80 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 RN7SKP167-201ENST00000411047 285 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 NRBF2P2-201ENST00000413087 861 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 EIF1P3-201ENST00000423841 334 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 CEACAMP1-201ENST00000434624 1035 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 XKRYP6-201ENST00000440468 1116 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 XKRYP3-201ENST00000442113 1116 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 RPL7P22-201ENST00000466005 733 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC002456.2-201ENST00000509356 380 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 PARP4P3-201ENST00000510265 317 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC034244.2-201ENST00000514668 858 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 SNORD116-26-201ENST00000516006 96 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC104997.1-201ENST00000519761 717 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC068714.1-201ENST00000559623 800 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 ARF4P1-201ENST00000605447 541 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC005021.1-201ENST00000608730 355 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 AC006338.2-201ENST00000616864 791 ntBASIC4.46□□□□□ -1.7
RPRD1AQ96P16 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RPRD1AQ96P16 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RNU1-132P-201ENST00000364300 164 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RNA5SP22-201ENST00000365393 109 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RNA5SP366-201ENST00000365454 123 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 OR6C69P-201ENST00000394268 893 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RPL23AP26-201ENST00000412728 464 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 MFSD13B-201ENST00000420133 1290 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 UBE2V2P3-201ENST00000433562 437 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AL512326.1-201ENST00000443050 721 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RPL23AP2-201ENST00000471227 466 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RPL35P6-201ENST00000490024 372 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 RNU6-347P-201ENST00000516658 105 ntBASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.45□□□□□ -1.7
RPRD1AQ96P16 AC068020.1-201ENST00000594215 661 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms