Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RNU6-181P-201ENST00000363225 107 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RN7SKP275-201ENST00000364626 301 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 Y_RNA.402-201ENST00000383972 102 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 MIR506-201ENST00000384998 124 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 GSTA9P-201ENST00000406231 611 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RNA5SP251-201ENST00000410614 137 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RPS3AP3-201ENST00000411933 242 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC245884.2-201ENST00000426257 404 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RPS24P8-201ENST00000431490 402 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC002504.1-201ENST00000438281 691 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 HMGN1P2-201ENST00000445197 310 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL445466.1-201ENST00000448432 357 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC124945.1-201ENST00000485133 188 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 OR5H5P-201ENST00000503164 928 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC108064.1-201ENST00000513791 460 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 SCARNA6.1-201ENST00000516989 238 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC022878.1-201ENST00000530684 149 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 NMNAT1P1-201ENST00000554095 876 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC007494.1-201ENST00000562293 760 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC090236.2-201ENST00000587933 1101 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 BNIP3P23-201ENST00000599655 511 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC010200.2-201ENST00000605098 235 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC093648.1-201ENST00000623546 606 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 GNL2P1-201ENST00000451274 2190 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
PTCHD1Q96NR3 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RBPJP7-201ENST00000442803 1447 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RBPJP5-201ENST00000449433 1447 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 OR4K15-201ENST00000305051 1216 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RN7SKP186-201ENST00000365371 303 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 MT-TL1-201ENST00000386347 75 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 CALM2P3-201ENST00000400429 449 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 VN1R8P-201ENST00000407739 893 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RBMY2KP-201ENST00000418221 992 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RPL7P30-201ENST00000420888 709 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC069157.1-201ENST00000421749 137 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AL158073.1-201ENST00000426848 1104 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ELOCP14-201ENST00000428070 331 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 TIMM9P3-201ENST00000428659 274 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC022022.1-201ENST00000430304 178 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 ELOCP7-201ENST00000439968 331 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 EIF5AP4-201ENST00000441206 465 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 USP9YP8-201ENST00000441913 500 ntBASIC5.66□□□□□ -1.5
PTCHD1Q96NR3 RPS4XP4-201ENST00000443195 763 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms