Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 BTBD10P1-201ENST00000549824 1352 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 RNU6-167P-201ENST00000384292 106 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 RPL17P50-201ENST00000396131 546 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 NPM1P38-201ENST00000403835 865 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC115285.1-201ENST00000424879 736 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AL445584.1-201ENST00000431451 330 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 ARL4AP4-201ENST00000434170 518 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 IGKV2-38-201ENST00000517443 247 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 ADAM3B-201ENST00000569937 840 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC090912.3-201ENST00000609775 533 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC7Q96M83 AL773545.4-201ENST00000637262 310 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AL513478.4-201ENST00000641636 310 ntBASIC5.67□□□□□ -1.5
CCDC7Q96M83 AC093849.1-201ENST00000563631 2209 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 SCN1A-220ENST00000641603 12506 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 OR11H4-201ENST00000315409 1082 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 AL160275.2-201ENST00000412010 394 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 RPL37P1-201ENST00000432310 284 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 ELOCP18-201ENST00000434209 337 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 RPS4XP4-201ENST00000443195 763 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 RPL7P1-201ENST00000468161 747 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 RPL7P9-201ENST00000468715 747 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 HMGB1P19-201ENST00000517578 577 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 AC104662.1-201ENST00000604448 511 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 AC090246.1-201ENST00000616499 426 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 AC012442.3-202ENST00000636742 206 ntBASIC5.66□□□□□ -1.5
CCDC7Q96M83 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC7Q96M83 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC7Q96M83 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC7Q96M83 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC7Q96M83 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC7Q96M83 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC7Q96M83 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CCDC7Q96M83 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC7Q96M83 SNORD74.4-201ENST00000364129 80 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 SNORD46.1-201ENST00000364139 104 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 AL672167.2-201ENST00000377164 879 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 MIR449B-201ENST00000384995 97 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 SNORA11.1-201ENST00000408133 129 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 SNORA81-201ENST00000408493 178 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 HSPE1P12-201ENST00000412576 301 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 TCEA1P4-201ENST00000415066 844 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 RPL29P14-201ENST00000495837 428 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 HNRNPCP4-201ENST00000571636 900 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 AC099669.2-201ENST00000616549 437 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC7Q96M83 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC7Q96M83 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC7Q96M83 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC7Q96M83 AC068254.2-201ENST00000623938 3577 ntBASIC5.65□□□□□ -1.51
CCDC7Q96M83 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 ZNF962P-201ENST00000443465 3140 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 TBCAP1-201ENST00000436520 327 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 RPL6P5-201ENST00000445678 828 ntBASIC5.64□□□□□ -1.51
CCDC7Q96M83 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC7Q96M83 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC7Q96M83 ASNSP4-201ENST00000511103 447 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms