Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL021918.2-201ENST00000613415 194 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL512624.1-201ENST00000613638 469 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 ABCA11P-202ENST00000504019 2110 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC092162.3-201ENST00000624511 1624 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC018765.1-201ENST00000623357 3446 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RNU6-845P-201ENST00000362578 103 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.72-201ENST00000362894 103 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.86-201ENST00000363020 111 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RNA5SP500-201ENST00000364486 119 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SNORD81.2-201ENST00000365153 76 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 MT-TR-201ENST00000387439 65 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 U3.25-201ENST00000391209 220 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SNRPEP2-201ENST00000397592 279 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 Z97832.1-201ENST00000402490 328 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RPS3AP2-201ENST00000407190 754 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RSU1P3-201ENST00000412878 835 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RPS26P13-201ENST00000419030 330 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 PDCL2P1-201ENST00000419302 352 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC018644.1-201ENST00000429934 551 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SDCBPP1-201ENST00000440192 890 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RPL38P1-201ENST00000460914 211 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 PSAT1P4-201ENST00000466500 526 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 GAPDHP39-201ENST00000481866 979 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC124945.1-201ENST00000485133 188 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 MTND4LP22-201ENST00000508209 276 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 SNORA18.6-201ENST00000516792 115 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 OR6M2P-201ENST00000529831 871 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC007424.1-203ENST00000554613 687 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC137800.2-201ENST00000574375 120 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 BNIP3P8-201ENST00000597863 560 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC010200.2-201ENST00000605098 235 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AL138960.1-201ENST00000613838 513 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AP001506.1-201ENST00000615444 211 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC024940.5-201ENST00000622889 474 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 AC068880.5-201ENST00000624331 290 ntBASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SHKBP1Q8TBC3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.27□□□□□ -1.4
SHKBP1Q8TBC3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
SHKBP1Q8TBC3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 DCAF13P3-201ENST00000561147 1334 ntBASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 AL449283.1-201ENST00000602631 3403 ntBASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 AC096921.2-201ENST00000561507 1916 ntBASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
SHKBP1Q8TBC3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms