Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CLHC1Q8NHS4 SPATA2P1-201ENST00000431223 2055 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC138393.1-206ENST00000540997 1886 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 SNORA58B-201ENST00000364259 136 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 RNA5SP175-201ENST00000364275 119 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 USP9YP9-201ENST00000429406 715 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 RPL23AP52-201ENST00000439311 478 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 SEPT7P6-201ENST00000469999 1143 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 RPS27AP16-201ENST00000492222 470 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 RPL23AP72-201ENST00000492447 435 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 IGLVIV-53-201ENST00000520107 367 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AP000827.1-201ENST00000527814 258 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AP006289.1-201ENST00000538089 277 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC005255.1-201ENST00000593748 216 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC115286.1-201ENST00000604298 434 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC115621.1-201ENST00000604653 858 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC012409.3-201ENST00000611343 981 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 MIR7703-201ENST00000620784 77 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AL592148.3-201ENST00000608771 2646 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC017007.4-201ENST00000503353 1352 ntBASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.1□□□□□ -1.75
CLHC1Q8NHS4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 OR4K15-201ENST00000305051 1216 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 RNA5SP513-201ENST00000364648 118 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 RHOT1P2-201ENST00000366423 333 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 MIR124-3-201ENST00000384866 87 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 MIR320B1-201ENST00000390209 79 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC240504.1-201ENST00000395709 845 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AL133270.1-201ENST00000402635 279 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC010740.1-201ENST00000417035 684 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 CEACAMP1-201ENST00000434624 1035 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 MTCYBP29-201ENST00000436327 1006 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC006466.1-201ENST00000438721 289 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC012170.1-201ENST00000495139 359 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC104164.2-201ENST00000496953 495 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC113398.2-201ENST00000507630 558 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 RPL12P25-202ENST00000598100 674 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC010680.4-201ENST00000605334 543 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC139769.3-201ENST00000618383 175 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC004943.3-201ENST00000624116 600 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 DHX40P1-201ENST00000588725 1412 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC105074.1-201ENST00000623380 3095 ntBASIC4.09□□□□□ -1.75
CLHC1Q8NHS4 AC025031.4-201ENST00000621248 3271 ntBASIC4.09□□□□□ -1.76
CLHC1Q8NHS4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CLHC1Q8NHS4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLHC1Q8NHS4 MFSD8-242ENST00000641690 4199 ntBASIC4.09□□□□□ -1.76
CLHC1Q8NHS4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLHC1Q8NHS4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 OR5P1P-201ENST00000299512 925 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 RNU6-1251P-201ENST00000364502 107 ntBASIC4.08□□□□□ -1.76
CLHC1Q8NHS4 RNA5SP505-201ENST00000364748 108 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms