Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 SNORD113.2-201ENST00000364166 89 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RNU6-481P-201ENST00000384194 107 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RNU6-298P-201ENST00000390888 96 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL049697.2-201ENST00000403708 294 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL445183.3-201ENST00000414168 502 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDY14P-201ENST00000431260 1014 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 MED6P1-201ENST00000439659 713 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDY12P-201ENST00000440679 1015 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RPL7P33-201ENST00000444159 742 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDY13P-201ENST00000445813 1015 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RPL23AP43-201ENST00000446445 471 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RAB28P3-201ENST00000448325 597 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDY23P-201ENST00000451661 1014 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RN7SL826P-201ENST00000479724 288 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 LARP7P4-201ENST00000481075 878 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC093270.2-201ENST00000486157 792 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 RN7SL812P-201ENST00000493791 279 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 STMN1P2-201ENST00000508435 439 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 PRELID3BP5-201ENST00000508612 460 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC100770.1-201ENST00000532310 322 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC025918.2-201ENST00000558683 763 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC069061.3-201ENST00000582254 823 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AP002884.5-201ENST00000595053 1132 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC090181.2-201ENST00000602975 672 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC005034.4-201ENST00000603612 899 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC079880.2-201ENST00000603790 1213 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL450336.1-201ENST00000605180 586 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC015922.4-201ENST00000612568 690 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AL138721.1-201ENST00000616756 179 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AP005019.3-201ENST00000620418 560 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC074140.1-201ENST00000621617 208 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC091953.3-201ENST00000623220 236 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC138907.10-201ENST00000623708 983 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CDC27P2-201ENST00000425026 1922 ntBASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.1□□□□□ -1.75
ZNF440Q8IYI8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 OR4K15-201ENST00000305051 1216 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 SNORA70F-201ENST00000384142 135 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 RNU6-796P-201ENST00000391086 107 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 RN7SKP216-201ENST00000411050 312 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC241520.1-201ENST00000422654 1099 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AL590762.4-201ENST00000425885 253 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 MTCO1P51-201ENST00000427672 1060 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 Z77249.1-201ENST00000444622 1175 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 RPL7P55-201ENST00000450522 746 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 HMGB1P26-201ENST00000452520 628 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 RPL23AP23-201ENST00000452590 471 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC008379.1-201ENST00000463655 464 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 SETP6-201ENST00000479329 568 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC010374.1-201ENST00000503762 1237 ntBASIC4.09□□□□□ -1.75
ZNF440Q8IYI8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms