Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL671309.1-201ENST00000603750 544 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC135178.6-201ENST00000605314 398 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC025175.1-201ENST00000606482 759 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC114781.5-201ENST00000615297 108 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AL023881.1-201ENST00000621088 301 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AC145207.9-201ENST00000623802 325 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AP000843.1-201ENST00000624880 701 ntBASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
C9orf40Q8IXQ3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP175-201ENST00000364275 119 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 RNA5SP22-201ENST00000365393 109 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 C4BPAP2-201ENST00000428434 478 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC073508.1-201ENST00000428866 656 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 RPL17P35-201ENST00000432217 549 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 ACTR3P2-201ENST00000439585 1257 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AL035551.1-201ENST00000446931 348 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC108729.2-201ENST00000476543 840 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC083829.1-201ENST00000503756 657 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 MTND3P24-201ENST00000506306 329 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 HMGB3P13-201ENST00000511263 607 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC108120.2-201ENST00000512973 294 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC103833.1-201ENST00000517442 172 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC004923.2-201ENST00000529649 369 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 NPM1P35-201ENST00000533043 868 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC069240.1-201ENST00000548774 375 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 PSMB7P1-201ENST00000556349 514 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC233266.2-201ENST00000567067 528 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 KPNA2P3-201ENST00000584190 848 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC012557.1-201ENST00000607115 611 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC004775.1-201ENST00000607389 753 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 MLECP1-201ENST00000615893 709 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AL445363.3-201ENST00000623080 671 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC055839.1-201ENST00000634467 498 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AC119674.1-212ENST00000641155 993 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 AL158163.1-201ENST00000603915 1649 ntBASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
C9orf40Q8IXQ3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 OR10J6P-201ENST00000289731 930 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 RNU1-132P-201ENST00000364300 164 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 RNU6-532P-201ENST00000384318 107 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC233289.1-201ENST00000403700 508 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 HDGFP1-201ENST00000405943 252 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AMMECR1LP1-201ENST00000415152 841 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MFSD13B-201ENST00000420133 1290 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AL157831.1-201ENST00000426134 473 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MTND2P2-201ENST00000434633 945 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 MTND2P6-201ENST00000455337 1030 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 RPL7P22-201ENST00000466005 733 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC109327.1-201ENST00000471666 403 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC012158.1-204ENST00000483430 465 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC041039.1-201ENST00000485656 536 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 RN7SL691P-201ENST00000494487 301 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC025445.1-201ENST00000502728 300 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC010374.1-201ENST00000503762 1237 ntBASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4□□□□□ -1.77
C9orf40Q8IXQ3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms