Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MEMO1P4-201ENST00000453590 386 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 FAM133DP-201ENST00000464802 691 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC015724.1-201ENST00000478577 156 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RN7SL273P-201ENST00000481561 299 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 SNX5P1-201ENST00000505757 1041 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 SNORA43.3-201ENST00000517240 103 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 IGHV3-32-201ENST00000519182 355 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MTND4LP18-201ENST00000526864 291 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC004217.3-201ENST00000551552 878 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 TRAV15-201ENST00000556680 249 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 RN7SL753P-201ENST00000581238 290 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 SLC25A36P1-201ENST00000590111 465 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL137072.1-201ENST00000603444 466 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC090517.2-201ENST00000614966 680 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL356596.1-201ENST00000624230 379 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL691477.1-201ENST00000624398 162 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AL049767.1-202ENST00000637826 242 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MTND4P16-201ENST00000466108 1367 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 AP005435.3-201ENST00000531260 3198 ntBASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
TRIM48Q8IWZ4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 RNU6-492P-201ENST00000363035 104 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 SNORD116-23-201ENST00000384645 92 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL590763.1-201ENST00000398297 1545 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL354868.1-201ENST00000417077 482 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 CHEK2P5-201ENST00000423877 246 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 MTND5P26-201ENST00000426018 1752 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 CYCSP11-201ENST00000436426 315 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC096775.1-201ENST00000437724 448 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC002504.1-201ENST00000438281 691 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 SUMO2P3-201ENST00000438311 288 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 RPS23P6-201ENST00000466136 431 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 RPS17P15-201ENST00000475609 349 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 MTND6P6-201ENST00000478031 263 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC006539.1-201ENST00000481419 501 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AL358832.1-201ENST00000497800 389 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC108078.3-201ENST00000502633 489 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC105384.2-201ENST00000508433 640 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC011411.1-201ENST00000509592 876 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC074255.1-201ENST00000511259 501 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC021678.3-201ENST00000517893 476 ntBASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM48Q8IWZ4 OR5BR1P-201ENST00000524992 1330 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms