Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL034370.1-201ENST00000397254 1590 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 OR4G2P-201ENST00000328113 903 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RPL23AP57-201ENST00000332361 466 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 Y_RNA.11-201ENST00000362375 109 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RNA5SP375-201ENST00000362975 119 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RN7SKP128-201ENST00000364270 303 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RNU6-603P-201ENST00000411403 107 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RPL34P3-201ENST00000421454 338 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC099336.2-201ENST00000422457 254 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC113412.1-201ENST00000425840 504 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC234779.1-201ENST00000425910 285 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL356583.2-201ENST00000426536 280 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 BRWD1P3-201ENST00000428816 390 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 NANOGP6-201ENST00000429190 847 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC244505.5-201ENST00000443639 207 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC099560.2-201ENST00000457554 255 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RNU7-136P-201ENST00000458819 69 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 PPIAP21-201ENST00000464473 501 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RPL31P58-201ENST00000469001 379 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RPS26P39-201ENST00000469206 341 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AP000893.1-201ENST00000474462 794 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RN7SL629P-201ENST00000489622 285 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 SUMO2P7-201ENST00000511179 285 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 KCTD9P2-201ENST00000512203 1013 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 RNU6-506P-201ENST00000516553 94 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 TPM3P3-201ENST00000521343 354 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MED28P5-201ENST00000528254 438 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 CYCSP28-201ENST00000534284 321 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC009101.1-201ENST00000568135 242 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC137800.2-201ENST00000574375 120 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MIR3189-201ENST00000578735 73 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MAGOH2P-202ENST00000584384 429 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC119501.1-201ENST00000603646 475 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC097468.3-201ENST00000607956 456 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AC007038.2-201ENST00000608095 740 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 AP001506.1-201ENST00000615444 211 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 U6.101-201ENST00000637707 76 ntBASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS4Q8IUM7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 TNPO1P2-201ENST00000426249 2665 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 SALL4P7-201ENST00000555779 3120 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AP002907.1-201ENST00000606361 1430 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 COX6CP17-201ENST00000421389 185 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 BX510359.3-201ENST00000422168 306 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 COX6CP15-201ENST00000426313 211 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC109583.1-201ENST00000432156 268 ntBASIC6.53□□□□□ -1.36
NPAS4Q8IUM7 AC073614.1-201ENST00000438690 650 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms