Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 OR5W1P-201ENST00000423705 938 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 Z82205.1-201ENST00000428456 297 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC005033.1-201ENST00000428904 813 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ARL2BPP10-201ENST00000446487 531 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 MTND5P22-201ENST00000458380 195 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RN7SL170P-201ENST00000487098 295 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RPL36AP51-201ENST00000487216 318 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC093809.1-201ENST00000509155 340 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 OR4D12P-201ENST00000509361 911 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 KHDC1P1-201ENST00000511053 508 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC112206.3-201ENST00000514578 389 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AP000790.1-201ENST00000528891 737 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC005363.1-201ENST00000530779 351 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL109918.3-201ENST00000603072 338 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC004853.1-201ENST00000604902 698 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC011816.2-201ENST00000607089 556 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC010325.3-201ENST00000641084 394 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL359976.1-201ENST00000418655 3528 ntBASIC5.68□□□□□ -1.5
ATG4DQ86TL0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4DQ86TL0 LINC01613-201ENST00000561476 2780 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 CASC19-246ENST00000641625 1606 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AL022323.4-201ENST00000623980 13120 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 TMSB4XP2-201ENST00000335179 210 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.184-201ENST00000363884 108 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.259-201ENST00000364619 101 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 MIR621-201ENST00000384919 96 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RNU6-77P-201ENST00000410554 91 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RN7SKP279-201ENST00000411383 298 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 OSTCP4-201ENST00000424397 449 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 Z93242.1-201ENST00000427102 353 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 SKP1P3-201ENST00000429280 487 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 BMS1P19-201ENST00000433925 393 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 HSPE1P28-201ENST00000443139 211 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC118758.1-202ENST00000454719 225 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RPL34P33-201ENST00000486062 334 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RPS27P20-201ENST00000492051 246 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC018797.1-201ENST00000510791 255 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 KCTD9P2-201ENST00000512203 1013 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 RNA5SP206-201ENST00000516703 121 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC008429.4-201ENST00000521201 182 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AP001858.2-201ENST00000536213 601 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC018630.1-201ENST00000541376 925 ntBASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4DQ86TL0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms