Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.72□□□□□ -1.33
LYSMD3Q7Z3D4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LYSMD3Q7Z3D4 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 AL355377.1-201ENST00000621125 1653 ntBASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 AC022034.1-201ENST00000512867 2156 ntBASIC6.71□□□□□ -1.33
LYSMD3Q7Z3D4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC046144.1-201ENST00000478559 1853 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.46-201ENST00000362695 102 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RNU4-20P-201ENST00000365601 151 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 BTBD10P2-201ENST00000404779 676 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 MIR1266-201ENST00000408125 84 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RNU2-18P-201ENST00000411224 162 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AL354890.1-201ENST00000413730 346 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 SPATA20P1-201ENST00000423089 438 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AL049734.2-201ENST00000441066 616 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC092809.1-201ENST00000441469 474 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 YWHAEP1-201ENST00000453697 763 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RNU7-63P-201ENST00000459054 62 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC015724.1-201ENST00000478577 156 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SL561P-201ENST00000488553 281 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 MTCO1P29-201ENST00000496868 288 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RPSAP51-201ENST00000497462 645 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 TMEM248P1-201ENST00000510579 951 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 OR5M2P-201ENST00000529003 936 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC011921.2-201ENST00000589465 152 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AP001521.1-201ENST00000609150 300 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 uc_338.15-201ENST00000615470 191 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RMST_9.1-201ENST00000619945 193 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 Z69720.2-201ENST00000624755 279 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC013488.1-201ENST00000526618 1838 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 AC034229.2-201ENST00000566945 2508 ntBASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LYSMD3Q7Z3D4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AP000547.3-204ENST00000588548 2523 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RNA5SP321-201ENST00000362722 111 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.148-201ENST00000363557 117 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 Y_RNA.255-201ENST00000364581 97 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 SNORA20.2-201ENST00000383922 131 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC026310.1-201ENST00000396004 378 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 SNORA11.5-201ENST00000408163 128 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RN7SKP221-201ENST00000410420 301 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 FAM183DP-201ENST00000421987 399 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RPS27AP15-201ENST00000447672 466 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RPS24P6-201ENST00000452670 400 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 RPS4XP10-201ENST00000465034 731 ntBASIC6.7□□□□□ -1.34
LYSMD3Q7Z3D4 AC099340.1-201ENST00000475247 599 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms