Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 OR2AM1P-201ENST00000422137 422 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL034379.1-201ENST00000423216 253 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 RPL7P57-201ENST00000423238 740 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MTCO3P30-201ENST00000426425 670 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC118469.1-201ENST00000442943 488 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC112498.1-201ENST00000444401 332 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MTND2P4-201ENST00000445034 1004 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL096803.2-201ENST00000450032 677 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MRPL35P4-201ENST00000453682 566 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MTND2P26-201ENST00000528255 1029 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AP003461.1-201ENST00000528866 78 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 HMGN2P6-201ENST00000551091 273 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC023813.2-201ENST00000564321 469 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC021483.2-201ENST00000567415 758 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 RN7SL802P-201ENST00000577858 299 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 OR7E18P-201ENST00000592589 702 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL583856.2-201ENST00000606298 543 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 BX323046.1-201ENST00000610145 535 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL450489.1-201ENST00000612071 468 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC091905.4-201ENST00000623432 202 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC103706.2-201ENST00000638080 240 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC005261.4-201ENST00000600047 1385 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AL672167.1-205ENST00000641112 3080 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 INTS6P1-201ENST00000504674 2530 ntBASIC4.75□□□□□ -1.65
ZNF549Q6P9A3 AC139713.2-215ENST00000641428 5037 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RNU1-83P-201ENST00000363426 164 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RNU6-236P-201ENST00000363886 106 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 Y_RNA.201-201ENST00000364052 96 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 MCTS2P-201ENST00000394552 546 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 GSTA12P-201ENST00000402398 508 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RNU4-72P-201ENST00000410754 173 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC092638.1-201ENST00000411966 1275 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 BTF3L4P1-201ENST00000413813 468 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 XKRYP4-201ENST00000414395 483 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 MTND4P3-201ENST00000417829 541 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AL627308.1-201ENST00000435693 821 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 PTGES3P1-201ENST00000439531 483 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 ARL4AP3-201ENST00000441452 574 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 XKRYP5-201ENST00000449659 483 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC010733.1-201ENST00000451515 401 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC234781.3-201ENST00000452540 973 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 USP9YP25-201ENST00000457708 443 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC005410.1-202ENST00000460347 485 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RPL7AP6-201ENST00000477943 801 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 GAPDHP56-201ENST00000506031 988 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 RFPL4AP3-201ENST00000515267 345 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 NDUFS5P6-201ENST00000529136 295 ntBASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.74□□□□□ -1.65
ZNF549Q6P9A3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms