Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC083923.1-201ENST00000523708 376 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC027369.5-201ENST00000533838 755 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC087897.1-201ENST00000550134 156 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC027455.1-201ENST00000574104 594 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 RN7SL290P-201ENST00000578661 300 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC013468.1-201ENST00000608680 598 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AL162574.1-201ENST00000615702 950 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC006840.1-201ENST00000623069 542 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AC083843.3-201ENST00000623679 2186 ntBASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM71Q2Q1W2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 KARSP3-201ENST00000571212 1504 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 OR4K15-201ENST00000305051 1216 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RNU6-543P-201ENST00000362576 108 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RNU6-98P-201ENST00000384173 107 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL035079.1-201ENST00000405210 287 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 MIR1303-201ENST00000408625 86 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RNA5SP345-201ENST00000410646 108 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC114755.2-201ENST00000413520 361 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 BTF3P8-201ENST00000414577 526 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 MTCO2P21-201ENST00000419780 677 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RPL23AP1-201ENST00000428990 471 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CNOT7P1-201ENST00000429006 852 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 USP9YP24-201ENST00000434374 697 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 USP9YP17-201ENST00000444617 696 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL691482.1-201ENST00000453255 87 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RPS5P7-201ENST00000456664 608 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ABCC13-202ENST00000463099 3842 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 OR52A4P-201ENST00000472867 958 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC008565.1-201ENST00000509046 885 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ENPP7P9-201ENST00000514456 627 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AP002812.4-201ENST00000532139 286 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC022884.2-201ENST00000578535 580 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL451086.1-201ENST00000605596 223 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC100847.1-201ENST00000611316 481 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AL022401.1-201ENST00000619498 108 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 DDX18P4-201ENST00000511690 1966 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 AC100871.1-201ENST00000507871 1456 ntBASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM71Q2Q1W2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM71Q2Q1W2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM71Q2Q1W2 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM71Q2Q1W2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TRIM71Q2Q1W2 AL606537.1-201ENST00000607258 2011 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms