Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL158071.1-201ENST00000430315 461 ntBASIC2.4□□□□□ -2.02
HSPG2P98160 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC2.4□□□□□ -2.02
HSPG2P98160 AC243654.2-201ENST00000612843 443 ntBASIC2.4□□□□□ -2.02
HSPG2P98160 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC2.4□□□□□ -2.02
HSPG2P98160 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
HSPG2P98160 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
HSPG2P98160 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
HSPG2P98160 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HSPG2P98160 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 RPS3AP46-201ENST00000448352 682 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 BTF3P5-201ENST00000457252 467 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AC006511.1-201ENST00000470614 315 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 RPL21P13-201ENST00000488305 481 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AC006349.1-201ENST00000555526 235 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AC005520.3-201ENST00000602874 370 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AL353726.1-201ENST00000614041 1000 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AC026368.1-201ENST00000614934 690 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AP005264.7-201ENST00000625003 745 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC2.4□□□□□ -2.03
HSPG2P98160 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.4□□□□□ -2.03
HSPG2P98160 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.4□□□□□ -2.03
HSPG2P98160 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 GSTA8P-201ENST00000404253 637 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.4□□□□□ -2.03
HSPG2P98160 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
HSPG2P98160 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 AP000432.2-201ENST00000624164 2048 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 HSPA8P17-201ENST00000427029 1382 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.4□□□□□ -2.03
HSPG2P98160 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 HYDIN2-203ENST00000614586 13885 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HSPG2P98160 SNORD96B-201ENST00000386148 79 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.4□□□□□ -2.03
HSPG2P98160 Z97055.1-201ENST00000419730 712 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.4□□□□□ -2.03
HSPG2P98160 RPL5P12-201ENST00000477071 851 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AC006539.2-201ENST00000601729 572 ntBASIC2.4□□□□□ -2.03
HSPG2P98160 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.4□□□□□ -2.03
HSPG2P98160 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HSPG2P98160 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 MAPK10-303ENST00000641324 3959 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HSPG2P98160 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HSPG2P98160 RNA5SP399-201ENST00000364003 117 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 S100A11P2-201ENST00000467589 312 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 RFPL4AP5-201ENST00000514977 504 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 MIR8057-201ENST00000620957 69 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AC006386.2-201ENST00000624491 75 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AC012005.1-201ENST00000624575 75 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 RPL5P18-201ENST00000406671 891 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 OSTCP5-201ENST00000425293 453 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 HMGN2P27-201ENST00000427352 270 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 RPL38P1-201ENST00000460914 211 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 RPL23AP65-201ENST00000475608 468 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 RPS4XP18-201ENST00000495480 763 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 CASC19-203ENST00000523510 575 ntTSL 3 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC2.39□□□□□ -2.03
HSPG2P98160 AC005344.1-201ENST00000613391 459 ntBASIC2.39□□□□□ -2.03
HSPG2P98160 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HSPG2P98160 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC2.39□□□□□ -2.03
HSPG2P98160 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms