Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.91□□□□□ -1.62
CCNA1P78396 MAPK10-349ENST00000641767 3661 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNA1P78396 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCNA1P78396 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCNA1P78396 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCNA1P78396 AC123912.3-201ENST00000600907 1367 ntBASIC4.91□□□□□ -1.62
CCNA1P78396 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CCNA1P78396 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCNA1P78396 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCNA1P78396 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.9□□□□□ -1.62
CCNA1P78396 AL592182.3-201ENST00000642132 3304 ntBASIC4.9□□□□□ -1.62
CCNA1P78396 SNORD65-201ENST00000391079 73 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 AP000357.1-201ENST00000409926 1165 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 RN7SKP97-201ENST00000410966 333 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 CYCSP19-201ENST00000411715 316 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 TRGV6-201ENST00000417928 299 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 RPL23AP46-201ENST00000438548 490 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC010460.1-201ENST00000507087 466 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCNA1P78396 NPM1P41-201ENST00000512920 831 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC115989.2-201ENST00000578640 563 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNA1P78396 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.9□□□□□ -1.63
CCNA1P78396 AC007546.2-201ENST00000623996 360 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CCNA1P78396 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CCNA1P78396 SPATA2P1-201ENST00000431223 2055 ntBASIC4.9□□□□□ -1.63
CCNA1P78396 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNA1P78396 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.9□□□□□ -1.63
CCNA1P78396 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CCNA1P78396 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNA1P78396 MAPK10-303ENST00000641324 3959 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCNA1P78396 RNU1-20P-201ENST00000363314 162 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 RNU6-304P-201ENST00000364855 107 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 LINC01881-201ENST00000416103 412 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 OR8F1P-201ENST00000425243 930 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNA1P78396 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNA1P78396 RPS26P2-201ENST00000440331 348 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 RRM2P4-201ENST00000441721 562 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 VN1R34P-201ENST00000447387 883 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 CCRL1P1-201ENST00000449542 1053 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNA1P78396 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNA1P78396 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CCNA1P78396 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 MIR8069-1-201ENST00000616627 86 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 AL133370.2-201ENST00000619934 439 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 MIR8069-2-201ENST00000621412 86 ntBASIC4.89□□□□□ -1.63
CCNA1P78396 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNA1P78396 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNA1P78396 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCNA1P78396 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CCNA1P78396 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNA1P78396 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNA1P78396 AC092162.3-201ENST00000624511 1624 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.88□□□□□ -1.63
CCNA1P78396 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNA1P78396 OR52B1P-201ENST00000316506 909 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 RNU6-1251P-201ENST00000364502 107 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 MIR670-201ENST00000390142 98 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCNA1P78396 RNA5SP171-201ENST00000391071 115 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 PTMAP2-201ENST00000397627 327 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 RNU6ATAC-201ENST00000408749 126 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.88□□□□□ -1.63
CCNA1P78396 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNA1P78396 AC007389.2-201ENST00000434630 306 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 GEMIN8P3-201ENST00000445417 720 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNA1P78396 IFNWP4-201ENST00000453148 294 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 RPL31P53-201ENST00000457065 348 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 METTL15P1-201ENST00000481421 1045 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AC146944.2-203ENST00000502493 354 ntBASIC4.88□□□□□ -1.63
CCNA1P78396 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.88□□□□□ -1.63
CCNA1P78396 AC139495.1-202ENST00000513164 354 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms