Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL354943.1-201ENST00000572103 781 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 AC022662.1-201ENST00000580252 331 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH12P55289 IMMP1LP3-201ENST00000604197 224 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AP005137.2-201ENST00000609238 400 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AC107075.1-201ENST00000613695 314 ntBASIC4.6□□□□□ -1.67
CDH12P55289 AP003399.1-201ENST00000637534 361 ntBASIC4.6□□□□□ -1.67
CDH12P55289 OR52B5P-202ENST00000641118 1110 ntBASIC4.6□□□□□ -1.67
CDH12P55289 MFSD8-245ENST00000641743 948 ntBASIC4.6□□□□□ -1.67
CDH12P55289 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH12P55289 AC009643.2-201ENST00000603543 1448 ntBASIC4.6□□□□□ -1.67
CDH12P55289 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 AC006042.3-201ENST00000454684 1469 ntBASIC4.6□□□□□ -1.67
CDH12P55289 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH12P55289 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.6□□□□□ -1.67
CDH12P55289 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH12P55289 NACA3P-201ENST00000359690 648 ntBASIC4.59□□□□□ -1.67
CDH12P55289 RNU6-707P-201ENST00000364647 95 ntBASIC4.59□□□□□ -1.67
CDH12P55289 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC009518.2-201ENST00000418056 731 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC114814.2-201ENST00000419195 485 ntBASIC4.59□□□□□ -1.67
CDH12P55289 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 CHEK2P5-201ENST00000423877 246 ntBASIC4.59□□□□□ -1.67
CDH12P55289 RPL21P43-201ENST00000425440 472 ntBASIC4.59□□□□□ -1.67
CDH12P55289 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH12P55289 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 RPS29P9-201ENST00000440360 171 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AL391987.1-201ENST00000441025 200 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC007327.1-201ENST00000447461 264 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AL606490.1-201ENST00000452266 765 ntBASIC4.59□□□□□ -1.67
CDH12P55289 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 ATG12P2-201ENST00000456830 416 ntBASIC4.59□□□□□ -1.67
CDH12P55289 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 RPS3AP22-201ENST00000488297 769 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AL035404.1-201ENST00000497982 568 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 AC010350.1-201ENST00000504908 231 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC010486.3-201ENST00000511602 785 ntBASIC4.59□□□□□ -1.67
CDH12P55289 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 AC118465.1-201ENST00000513820 1271 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 FABP5P12-201ENST00000515543 389 ntBASIC4.59□□□□□ -1.67
CDH12P55289 IGLVIV-64-201ENST00000518581 301 ntBASIC4.59□□□□□ -1.67
CDH12P55289 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 DDX18P5-201ENST00000534547 1306 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
CDH12P55289 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 BX005019.1-201ENST00000561881 1810 ntBASIC4.59□□□□□ -1.67
CDH12P55289 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 AC122134.1-201ENST00000565664 1104 ntBASIC4.59□□□□□ -1.67
CDH12P55289 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH12P55289 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH12P55289 AC068790.7-201ENST00000602347 528 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC011453.2-201ENST00000603737 729 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AL360219.1-201ENST00000610230 366 ntBASIC4.59□□□□□ -1.67
CDH12P55289 uc_338.9-201ENST00000617424 182 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AC131159.1-201ENST00000621854 213 ntBASIC4.59□□□□□ -1.67
CDH12P55289 AP002505.2-201ENST00000623585 696 ntBASIC4.59□□□□□ -1.67
CDH12P55289 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH12P55289 AC087821.2-201ENST00000637086 450 ntBASIC4.59□□□□□ -1.67
CDH12P55289 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH12P55289 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH12P55289 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
CDH12P55289 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDH12P55289 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDH12P55289 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH12P55289 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH12P55289 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms