Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH11P55287 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH11P55287 OR14L1P-202ENST00000641545 3009 ntBASIC4.36□□□□□ -1.71
CDH11P55287 DDX18P4-201ENST00000511690 1966 ntBASIC4.36□□□□□ -1.71
CDH11P55287 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH11P55287 IRF5P1-201ENST00000504852 2164 ntBASIC4.36□□□□□ -1.71
CDH11P55287 A2MP1-204ENST00000566278 4130 ntBASIC4.36□□□□□ -1.71
CDH11P55287 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 AC027290.2-201ENST00000623210 18662 ntBASIC4.35□□□□□ -1.71
CDH11P55287 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CDH11P55287 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDH11P55287 RNU6-98P-201ENST00000384173 107 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AL603865.2-201ENST00000401679 213 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AL357515.1-201ENST00000402967 542 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AL080315.1-201ENST00000406055 466 ntBASIC4.35□□□□□ -1.71
CDH11P55287 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 AC092638.1-201ENST00000411966 1275 ntBASIC4.35□□□□□ -1.71
CDH11P55287 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH11P55287 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.35□□□□□ -1.71
CDH11P55287 MTND2P2-201ENST00000434633 945 ntBASIC4.35□□□□□ -1.71
CDH11P55287 MTCO1P53-201ENST00000441633 699 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 SEPT14P24-201ENST00000447236 180 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AL050341.1-201ENST00000447743 313 ntBASIC4.35□□□□□ -1.71
CDH11P55287 OR51B8P-201ENST00000449892 769 ntBASIC4.35□□□□□ -1.71
CDH11P55287 OFD1P3Y-201ENST00000453312 783 ntBASIC4.35□□□□□ -1.71
CDH11P55287 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 RPL7AP52-201ENST00000458096 790 ntBASIC4.35□□□□□ -1.71
CDH11P55287 RPS4XP6-201ENST00000477670 797 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC104971.1-201ENST00000495117 578 ntBASIC4.35□□□□□ -1.71
CDH11P55287 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH11P55287 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH11P55287 BTF3P13-201ENST00000513224 490 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 RNU6-276P-201ENST00000516114 96 ntBASIC4.35□□□□□ -1.71
CDH11P55287 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH11P55287 OR7E13P-201ENST00000526052 910 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH11P55287 CR383656.6-201ENST00000550518 394 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC011611.5-201ENST00000552477 578 ntBASIC4.35□□□□□ -1.71
CDH11P55287 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.35□□□□□ -1.71
CDH11P55287 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 AC027104.1-201ENST00000563702 681 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC009117.1-201ENST00000563948 554 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH11P55287 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 AL160237.3-201ENST00000604114 1013 ntBASIC4.35□□□□□ -1.71
CDH11P55287 AC104985.3-201ENST00000623479 597 ntBASIC4.35□□□□□ -1.71
CDH11P55287 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.35□□□□□ -1.71
CDH11P55287 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 HSPA8P17-201ENST00000427029 1382 ntBASIC4.35□□□□□ -1.71
CDH11P55287 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.35□□□□□ -1.71
CDH11P55287 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDH11P55287 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.35□□□□□ -1.71
CDH11P55287 AC104118.1-201ENST00000607625 1589 ntBASIC4.35□□□□□ -1.71
CDH11P55287 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CDH11P55287 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH11P55287 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.34□□□□□ -1.71
CDH11P55287 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
CDH11P55287 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CDH11P55287 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDH11P55287 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 RPS24P12-201ENST00000402084 394 ntBASIC4.34□□□□□ -1.71
CDH11P55287 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH11P55287 AP000357.1-201ENST00000409926 1165 ntBASIC4.34□□□□□ -1.71
CDH11P55287 RN7SKP216-201ENST00000411050 312 ntBASIC4.34□□□□□ -1.71
CDH11P55287 TBCAP2-201ENST00000416175 326 ntBASIC4.34□□□□□ -1.71
CDH11P55287 OR51A6P-201ENST00000418680 1004 ntBASIC4.34□□□□□ -1.71
CDH11P55287 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH11P55287 AL451139.1-201ENST00000434718 346 ntBASIC4.34□□□□□ -1.71
CDH11P55287 FTH1P16-201ENST00000435241 552 ntBASIC4.34□□□□□ -1.71
CDH11P55287 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.34□□□□□ -1.71
CDH11P55287 AL358794.1-201ENST00000445689 381 ntBASIC4.34□□□□□ -1.71
CDH11P55287 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH11P55287 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH11P55287 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms