Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
MMP13P45452 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP13P45452 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP13P45452 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP13P45452 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP13P45452 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MMP13P45452 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MMP13P45452 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.06□□□□□ -1.6
MMP13P45452 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.06□□□□□ -1.6
MMP13P45452 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.06□□□□□ -1.6
MMP13P45452 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
MMP13P45452 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 RNU6-636P-201ENST00000384598 107 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 CHMP1B2P-201ENST00000399581 597 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL021331.1-201ENST00000402817 582 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AF186996.5-201ENST00000418098 904 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AL160175.1-201ENST00000428124 247 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC084290.1-201ENST00000434995 374 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 CCRL1P1-201ENST00000449542 1053 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.06□□□□□ -1.6
MMP13P45452 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 RN7SL517P-201ENST00000462240 305 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC021087.2-201ENST00000504656 1203 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AC010625.1-201ENST00000511296 403 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 LRRC6P1-201ENST00000532188 885 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.06□□□□□ -1.6
MMP13P45452 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC023813.2-201ENST00000564321 469 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC007599.1-201ENST00000568688 1174 ntBASIC5.06□□□□□ -1.6
MMP13P45452 TVP23CP2-201ENST00000571473 623 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.06□□□□□ -1.6
MMP13P45452 NBR2-204ENST00000587322 63 ntBASIC5.06□□□□□ -1.6
MMP13P45452 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AC004987.4-201ENST00000603383 338 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.06□□□□□ -1.6
MMP13P45452 AC087752.4-201ENST00000605911 462 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL583856.2-201ENST00000606298 543 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC245100.7-201ENST00000609678 442 ntBASIC5.06□□□□□ -1.6
MMP13P45452 uc_338.18-201ENST00000615451 175 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL049794.2-201ENST00000616301 365 ntBASIC5.06□□□□□ -1.6
MMP13P45452 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 AC019206.1-201ENST00000621938 425 ntBASIC5.06□□□□□ -1.6
MMP13P45452 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 AC090897.3-201ENST00000636973 1157 ntBASIC5.06□□□□□ -1.6
MMP13P45452 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.06□□□□□ -1.6
MMP13P45452 AL596275.2-204ENST00000641628 552 ntBASIC5.06□□□□□ -1.6
MMP13P45452 AL596275.2-206ENST00000641957 626 ntBASIC5.06□□□□□ -1.6
MMP13P45452 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 AC053481.2-202ENST00000582394 1500 ntBASIC5.06□□□□□ -1.6
MMP13P45452 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MMP13P45452 SGO1P1-201ENST00000603525 1447 ntBASIC5.06□□□□□ -1.6
MMP13P45452 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
MMP13P45452 DDX18P5-201ENST00000534547 1306 ntBASIC5.05□□□□□ -1.6
MMP13P45452 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MMP13P45452 AL034370.1-201ENST00000397254 1590 ntBASIC5.05□□□□□ -1.6
MMP13P45452 AC010132.2-201ENST00000295493 1043 ntBASIC5.05□□□□□ -1.6
MMP13P45452 IL6STP1-201ENST00000346911 1020 ntBASIC5.05□□□□□ -1.6
MMP13P45452 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MMP13P45452 SNORD113-6-201ENST00000363345 75 ntBASIC5.05□□□□□ -1.6
MMP13P45452 RNU1-83P-201ENST00000363426 164 ntBASIC5.05□□□□□ -1.6
MMP13P45452 SNORA70-201ENST00000384436 135 ntBASIC5.05□□□□□ -1.6
MMP13P45452 MIR105-2-201ENST00000385083 81 ntBASIC5.05□□□□□ -1.6
MMP13P45452 SNORD96B-201ENST00000386148 79 ntBASIC5.05□□□□□ -1.6
MMP13P45452 MCTS2P-201ENST00000394552 546 ntBASIC5.05□□□□□ -1.6
MMP13P45452 AP002784.2-201ENST00000397300 549 ntBASIC5.05□□□□□ -1.6
MMP13P45452 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.05□□□□□ -1.6
MMP13P45452 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms