Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RPS3AP41-201ENST00000462701 778 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC093270.2-201ENST00000486157 792 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC134050.1-201ENST00000495088 933 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN9P43378 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.96□□□□□ -1.62
PTPN9P43378 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN9P43378 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.96□□□□□ -1.62
PTPN9P43378 POLR2KP1-201ENST00000553226 168 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC022884.3-201ENST00000579571 248 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 MIR3667-201ENST00000581025 74 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 MIR4737-201ENST00000583979 81 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 ZNF92P3-201ENST00000596594 954 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC022022.2-201ENST00000602989 360 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AL391358.1-201ENST00000605342 190 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC009974.1-201ENST00000608881 455 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC123767.1-202ENST00000620407 817 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.96□□□□□ -1.62
PTPN9P43378 AP003497.2-201ENST00000624220 967 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 U6.107-201ENST00000637108 79 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN9P43378 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTPN9P43378 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTPN9P43378 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.96□□□□□ -1.62
PTPN9P43378 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 SDAD1P1-202ENST00000524156 2051 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 MTCO1P6-201ENST00000481192 1384 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PTPN9P43378 RNA5SP191-201ENST00000362585 102 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 RNU6-906P-201ENST00000384700 70 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 RN7SKP125-201ENST00000410481 302 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 RSU1P3-201ENST00000412878 835 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC004074.1-201ENST00000421810 1063 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC246680.2-201ENST00000422106 389 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 XKRYP1-201ENST00000423438 492 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 XKRYP2-201ENST00000432915 492 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 MTCYBP15-201ENST00000433123 1127 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 VN1R25P-201ENST00000443385 738 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC068135.1-201ENST00000446164 246 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC022431.1-201ENST00000450941 438 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 CYCSP34-201ENST00000458172 304 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC063943.1-201ENST00000465434 453 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 RPL32P9-201ENST00000487963 407 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC025164.1-201ENST00000496249 478 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 NDUFA5P12-201ENST00000503796 343 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC104108.1-201ENST00000509930 412 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC138938.1-201ENST00000515431 782 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 RN7SKP287-201ENST00000516546 266 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.95□□□□□ -1.62
PTPN9P43378 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 AP001880.2-201ENST00000538233 448 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.95□□□□□ -1.62
PTPN9P43378 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 EIF1P6-201ENST00000600054 334 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AL512782.1-201ENST00000603093 364 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AL031320.1-201ENST00000604177 357 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC090525.3-201ENST00000605601 189 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AL021707.7-201ENST00000607991 416 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC006946.3-201ENST00000609791 756 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 AL356863.1-201ENST00000623378 1080 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 AC109454.4-201ENST00000623411 649 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC120338.1-201ENST00000625074 1541 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
PTPN9P43378 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
PTPN9P43378 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTPN9P43378 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PTPN9P43378 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 AC100871.1-201ENST00000507871 1456 ntBASIC4.94□□□□□ -1.62
PTPN9P43378 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.94□□□□□ -1.62
PTPN9P43378 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PTPN9P43378 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PTPN9P43378 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PTPN9P43378 RNU1-82P-201ENST00000390851 165 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms