Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 Y_RNA.465-201ENST00000384293 102 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RNU2-17P-201ENST00000410290 190 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RN7SKP100-201ENST00000411258 284 ntBASIC7.02□□□□□ -1.29
RXRBP28702 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC7.02□□□□□ -1.29
RXRBP28702 ATG4AP1-201ENST00000416893 538 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AL109913.1-201ENST00000421173 514 ntBASIC7.02□□□□□ -1.29
RXRBP28702 OR6K4P-201ENST00000423179 955 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RPL7P11-201ENST00000437586 658 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RXRBP28702 RPL34P20-201ENST00000442771 351 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RAB11AP1-201ENST00000442978 646 ntBASIC7.02□□□□□ -1.29
RXRBP28702 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RXRBP28702 OR51B8P-201ENST00000449892 769 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC104634.1-201ENST00000452720 462 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RPL7L1P3-201ENST00000455249 689 ntBASIC7.02□□□□□ -1.29
RXRBP28702 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RXRBP28702 AP000797.2-201ENST00000475768 606 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC004924.1-201ENST00000480160 781 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC109486.1-201ENST00000486833 374 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC023050.1-201ENST00000498198 304 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC021087.2-201ENST00000504656 1203 ntBASIC7.02□□□□□ -1.29
RXRBP28702 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC7.02□□□□□ -1.29
RXRBP28702 GAPDHP56-201ENST00000506031 988 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC098799.2-201ENST00000509466 868 ntBASIC7.02□□□□□ -1.29
RXRBP28702 RNU6-718P-201ENST00000516166 105 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.02□□□□□ -1.29
RXRBP28702 AC106038.2-201ENST00000520706 568 ntBASIC7.02□□□□□ -1.29
RXRBP28702 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.02□□□□□ -1.29
RXRBP28702 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.02□□□□□ -1.29
RXRBP28702 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.02□□□□□ -1.29
RXRBP28702 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.02□□□□□ -1.29
RXRBP28702 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.02□□□□□ -1.29
RXRBP28702 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 AC004890.3-201ENST00000605566 1095 ntBASIC7.02□□□□□ -1.29
RXRBP28702 AC008443.7-201ENST00000622195 246 ntBASIC7.02□□□□□ -1.29
RXRBP28702 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RXRBP28702 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.02□□□□□ -1.29
RXRBP28702 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RXRBP28702 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RXRBP28702 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RXRBP28702 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 AL731556.1-201ENST00000394628 3711 ntBASIC7.01□□□□□ -1.29
RXRBP28702 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 AL355852.1-201ENST00000454081 1771 ntBASIC7.01□□□□□ -1.29
RXRBP28702 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RXRBP28702 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RXRBP28702 RNA5SP44-201ENST00000410446 133 ntBASIC7.01□□□□□ -1.29
RXRBP28702 RPL7P8-201ENST00000411964 730 ntBASIC7.01□□□□□ -1.29
RXRBP28702 OR51A5P-201ENST00000415429 942 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC023128.2-201ENST00000420880 1223 ntBASIC7.01□□□□□ -1.29
RXRBP28702 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.01□□□□□ -1.29
RXRBP28702 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.01□□□□□ -1.29
RXRBP28702 MTCO2P11-201ENST00000431069 680 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.01□□□□□ -1.29
RXRBP28702 LARP1BP3-201ENST00000437229 869 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 RBMY2TP-201ENST00000451162 947 ntBASIC7.01□□□□□ -1.29
RXRBP28702 KATNBL1P6-201ENST00000453433 915 ntBASIC7.01□□□□□ -1.29
RXRBP28702 RPL7P32-201ENST00000457119 744 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.01□□□□□ -1.29
RXRBP28702 AC113347.3-201ENST00000509113 148 ntBASIC7.01□□□□□ -1.29
RXRBP28702 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 SAP18P1-201ENST00000512058 390 ntBASIC7.01□□□□□ -1.29
RXRBP28702 RNU6-319P-201ENST00000516025 108 ntBASIC7.01□□□□□ -1.29
RXRBP28702 SCARNA13-201ENST00000516672 275 ntBASIC7.01□□□□□ -1.29
RXRBP28702 Y_RNA.702-201ENST00000516843 96 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 HIGD1AP17-201ENST00000554576 276 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC7.01□□□□□ -1.29
RXRBP28702 AC010547.7-201ENST00000570323 333 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 AC053481.3-201ENST00000577881 843 ntBASIC7.01□□□□□ -1.29
RXRBP28702 FGF7P1-201ENST00000582820 288 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC069545.1-201ENST00000605671 358 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AL121757.2-201ENST00000611223 313 ntBASIC7.01□□□□□ -1.29
RXRBP28702 U4.5-201ENST00000617137 123 ntBASIC7.01□□□□□ -1.29
RXRBP28702 AC139769.3-201ENST00000618383 175 ntBASIC7.01□□□□□ -1.29
RXRBP28702 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.01□□□□□ -1.29
RXRBP28702 MAPK10-263ENST00000641052 4307 ntBASIC7.01□□□□□ -1.29
RXRBP28702 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.01□□□□□ -1.29
RXRBP28702 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RXRBP28702 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms