Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010300.1-201ENST00000600671 5134 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.33□□□□□ -1.72
XRCC1P18887 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 AL078604.1-201ENST00000404609 466 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 UBTFL3-201ENST00000418934 1024 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC004552.1-201ENST00000419089 348 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 RPS12P5-201ENST00000423449 371 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 CR848007.2-201ENST00000424918 787 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.33□□□□□ -1.72
XRCC1P18887 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.33□□□□□ -1.72
XRCC1P18887 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 PHBP16-201ENST00000446318 950 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.33□□□□□ -1.72
XRCC1P18887 RN7SL303P-201ENST00000469773 251 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 RPS26P3-201ENST00000470205 348 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 UBTFL6-201ENST00000477929 1024 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC090543.2-201ENST00000483963 348 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC004057.1-201ENST00000485827 348 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC006499.6-201ENST00000511169 607 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 NDUFB4P12-201ENST00000513465 390 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC079587.1-201ENST00000603846 277 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC023813.4-201ENST00000607580 580 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.33□□□□□ -1.72
XRCC1P18887 MLECP1-201ENST00000615893 709 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 uc_338.13-201ENST00000618243 179 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AL162233.1-201ENST00000620014 944 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
XRCC1P18887 AL118508.4-201ENST00000624142 1176 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 AC011944.2-201ENST00000624440 683 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.33□□□□□ -1.72
XRCC1P18887 OR5AC4P-202ENST00000642086 985 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 MAPK10-304ENST00000641341 3984 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
XRCC1P18887 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.33□□□□□ -1.72
XRCC1P18887 AC139769.1-204ENST00000472297 1931 ntBASIC4.33□□□□□ -1.72
XRCC1P18887 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
XRCC1P18887 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
XRCC1P18887 AC090017.1-201ENST00000548612 1779 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
XRCC1P18887 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
XRCC1P18887 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC018529.3-201ENST00000624212 2254 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 MAPK10-253ENST00000641010 4072 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
XRCC1P18887 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
XRCC1P18887 RNU6-225P-201ENST00000384613 103 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 SNORA11F-201ENST00000408237 128 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 RNA5SP104-201ENST00000410989 118 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 RNA5SP39-201ENST00000411245 120 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC062016.2-201ENST00000420950 676 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 FAM204CP-201ENST00000424489 642 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 RPL23AP25-201ENST00000430973 463 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
XRCC1P18887 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 FHP1-201ENST00000442741 703 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC023512.1-201ENST00000444513 499 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 MTND2P3-201ENST00000452458 470 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 RPS27AP16-201ENST00000492222 470 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.32□□□□□ -1.72
XRCC1P18887 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 HMGB1P3-201ENST00000502802 616 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC106806.2-201ENST00000509365 500 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.32□□□□□ -1.72
XRCC1P18887 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC136624.4-201ENST00000573044 370 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC005962.2-201ENST00000611427 652 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC104307.1-201ENST00000616142 196 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.32□□□□□ -1.72
XRCC1P18887 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 NXPH1-205ENST00000602349 1953 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 AC090971.4-201ENST00000560291 1800 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 CCT8P1-201ENST00000413611 1657 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.32□□□□□ -1.72
XRCC1P18887 AC011266.1-201ENST00000624119 3569 ntBASIC4.32□□□□□ -1.72
XRCC1P18887 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
XRCC1P18887 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms