Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGA1P17096 SNORA57.3-201ENST00000411095 141 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGA1P17096 GSTM3P2-201ENST00000412746 530 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HMGA1P17096 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 Z74696.2-201ENST00000436514 498 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 AC091564.1-201ENST00000464563 479 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 AC091153.1-201ENST00000466297 402 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGA1P17096 AC025554.1-201ENST00000505641 188 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.08□□□□□ -1.76
HMGA1P17096 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 SETP1-201ENST00000556014 845 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 NPM1P47-201ENST00000560843 856 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 AC007066.2-202ENST00000566531 914 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 AC005261.6-201ENST00000623072 1387 ntBASIC4.08□□□□□ -1.76
HMGA1P17096 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HMGA1P17096 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.08□□□□□ -1.76
HMGA1P17096 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HMGA1P17096 AC097504.1-201ENST00000515103 2415 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGA1P17096 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 SNORA71.3-201ENST00000362582 128 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
HMGA1P17096 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGA1P17096 RPL37P1-201ENST00000432310 284 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 RANP8-201ENST00000444720 713 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 VN1R34P-201ENST00000447387 883 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 RPL21P11-201ENST00000461458 483 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 RPL21P6-201ENST00000479171 504 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 AC007991.1-201ENST00000522680 631 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.07□□□□□ -1.76
HMGA1P17096 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGA1P17096 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.07□□□□□ -1.76
HMGA1P17096 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.07□□□□□ -1.76
HMGA1P17096 AL139089.1-201ENST00000620372 975 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
HMGA1P17096 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.07□□□□□ -1.76
HMGA1P17096 AL442128.2-201ENST00000620246 1824 ntBASIC4.07□□□□□ -1.76
HMGA1P17096 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HMGA1P17096 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
HMGA1P17096 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 AL929601.4-201ENST00000613011 1341 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGA1P17096 ZNF602P-201ENST00000405929 924 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 HMGB1P37-201ENST00000439613 609 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGA1P17096 AC104306.1-201ENST00000449702 371 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 AC034236.1-201ENST00000469891 373 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGA1P17096 PAICSP4-201ENST00000517543 1253 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 OR5M7P-201ENST00000526140 972 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.06□□□□□ -1.76
HMGA1P17096 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGA1P17096 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.06□□□□□ -1.76
HMGA1P17096 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.06□□□□□ -1.76
HMGA1P17096 AC005344.1-201ENST00000613391 459 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 MIR6075-201ENST00000620782 95 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGA1P17096 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGA1P17096 AC055839.1-201ENST00000634467 498 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.06□□□□□ -1.76
HMGA1P17096 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HMGA1P17096 MAPK10-372ENST00000641954 3413 ntBASIC4.06□□□□□ -1.76
HMGA1P17096 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 AP004289.2-201ENST00000444413 1457 ntBASIC4.05□□□□□ -1.76
HMGA1P17096 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.05□□□□□ -1.76
HMGA1P17096 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HMGA1P17096 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms