Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MTCYBP2-201ENST00000407745 171 ntBASIC8.43□□□□□ -1.06
CD44P16070 RNA5SP498-201ENST00000411342 120 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC011753.4-201ENST00000417974 311 ntBASIC8.43□□□□□ -1.06
CD44P16070 RANP5-201ENST00000427731 655 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 AC007389.2-201ENST00000434630 306 ntBASIC8.43□□□□□ -1.06
CD44P16070 RPL36AP6-201ENST00000435770 321 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC114755.4-201ENST00000439114 443 ntBASIC8.43□□□□□ -1.06
CD44P16070 DBIL5P-202ENST00000453414 250 ntBASIC8.43□□□□□ -1.06
CD44P16070 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 RN7SL153P-201ENST00000486501 292 ntBASIC8.43□□□□□ -1.06
CD44P16070 OR51K1P-201ENST00000510214 950 ntBASIC8.43□□□□□ -1.06
CD44P16070 RNA5SP272-201ENST00000516095 111 ntBASIC8.43□□□□□ -1.06
CD44P16070 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 AC010186.2-204ENST00000537668 439 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC8.43□□□□□ -1.06
CD44P16070 AC144548.1-201ENST00000549577 324 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC8.43□□□□□ -1.06
CD44P16070 AC026468.1-201ENST00000614981 107 ntBASIC8.43□□□□□ -1.06
CD44P16070 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC8.43□□□□□ -1.06
CD44P16070 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.43□□□□□ -1.06
CD44P16070 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.43□□□□□ -1.06
CD44P16070 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
CD44P16070 MFSD8-217ENST00000641178 4374 ntBASIC8.43□□□□□ -1.06
CD44P16070 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 AC069222.1-201ENST00000608028 3360 ntBASIC8.42□□□□□ -1.06
CD44P16070 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 AURKA-205ENST00000395911 2145 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CD44P16070 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CD44P16070 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 Y_RNA.151-201ENST00000363566 112 ntBASIC8.42□□□□□ -1.06
CD44P16070 RNU6-596P-201ENST00000365395 98 ntBASIC8.42□□□□□ -1.06
CD44P16070 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC8.42□□□□□ -1.06
CD44P16070 RPL30P2-201ENST00000414021 291 ntBASIC8.42□□□□□ -1.06
CD44P16070 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC8.42□□□□□ -1.06
CD44P16070 RPS4XP5-201ENST00000419038 768 ntBASIC8.42□□□□□ -1.06
CD44P16070 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 RPL19P21-201ENST00000424919 591 ntBASIC8.42□□□□□ -1.06
CD44P16070 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC8.42□□□□□ -1.06
CD44P16070 AC239367.3-201ENST00000428996 814 ntBASIC8.42□□□□□ -1.06
CD44P16070 EIF3IP1-201ENST00000433048 967 ntBASIC8.42□□□□□ -1.06
CD44P16070 RPSAP49-201ENST00000445182 886 ntBASIC8.42□□□□□ -1.06
CD44P16070 TDGF1P6-201ENST00000463873 448 ntBASIC8.42□□□□□ -1.06
CD44P16070 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 AC099340.1-201ENST00000475247 599 ntBASIC8.42□□□□□ -1.06
CD44P16070 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 AC109811.2-201ENST00000509609 452 ntBASIC8.42□□□□□ -1.06
CD44P16070 AC016559.2-201ENST00000510759 359 ntBASIC8.42□□□□□ -1.06
CD44P16070 SNX18P23-201ENST00000510867 677 ntBASIC8.42□□□□□ -1.06
CD44P16070 AC008958.1-201ENST00000511047 682 ntBASIC8.42□□□□□ -1.06
CD44P16070 LEF1-218ENST00000512172 598 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 RNU6-971P-201ENST00000516920 106 ntBASIC8.42□□□□□ -1.06
CD44P16070 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC8.42□□□□□ -1.06
CD44P16070 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 AC100870.1-201ENST00000522035 505 ntBASIC8.42□□□□□ -1.06
CD44P16070 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC8.42□□□□□ -1.06
CD44P16070 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.42□□□□□ -1.06
CD44P16070 AC026956.1-201ENST00000558741 396 ntBASIC8.42□□□□□ -1.06
CD44P16070 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.42□□□□□ -1.06
CD44P16070 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC8.42□□□□□ -1.06
CD44P16070 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.42□□□□□ -1.06
CD44P16070 AC006363.1-201ENST00000603806 463 ntBASIC8.42□□□□□ -1.06
CD44P16070 RPL23AP90-201ENST00000603820 236 ntBASIC8.42□□□□□ -1.06
CD44P16070 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC8.42□□□□□ -1.06
CD44P16070 AC007603.3-201ENST00000636915 979 ntBASIC8.42□□□□□ -1.06
CD44P16070 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CD44P16070 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 AC009120.2-204ENST00000621548 2032 ntBASIC8.42□□□□□ -1.06
CD44P16070 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.42□□□□□ -1.06
CD44P16070 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CD44P16070 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
CD44P16070 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 AC011447.6-201ENST00000623510 2598 ntBASIC8.41□□□□□ -1.06
CD44P16070 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 HSP90AA4P-202ENST00000506915 2228 ntBASIC8.41□□□□□ -1.06
CD44P16070 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 BDP1P-201ENST00000582658 1990 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms