Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 AC103843.2-201ENST00000530523 682 ntBASIC3.96□□□□□ -1.78
VCANP13611 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.96□□□□□ -1.78
VCANP13611 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.96□□□□□ -1.78
VCANP13611 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VCANP13611 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
VCANP13611 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 AL022393.1-201ENST00000625142 1677 ntBASIC3.96□□□□□ -1.78
VCANP13611 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.96□□□□□ -1.78
VCANP13611 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.96□□□□□ -1.78
VCANP13611 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.96□□□□□ -1.78
VCANP13611 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.96□□□□□ -1.78
VCANP13611 AP001207.2-201ENST00000519490 539 ntBASIC3.96□□□□□ -1.78
VCANP13611 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.96□□□□□ -1.78
VCANP13611 MIR432-201ENST00000606207 94 ntBASIC3.96□□□□□ -1.78
VCANP13611 AP000648.2-201ENST00000624182 404 ntBASIC3.96□□□□□ -1.78
VCANP13611 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 AC116096.1-201ENST00000566804 2314 ntBASIC3.96□□□□□ -1.78
VCANP13611 AC126323.6-202ENST00000568092 3511 ntBASIC3.96□□□□□ -1.78
VCANP13611 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 AC239868.2-201ENST00000564237 4527 ntBASIC3.96□□□□□ -1.78
VCANP13611 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCANP13611 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.96□□□□□ -1.78
VCANP13611 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.96□□□□□ -1.78
VCANP13611 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.96□□□□□ -1.78
VCANP13611 AC083863.1-201ENST00000438811 231 ntBASIC3.96□□□□□ -1.78
VCANP13611 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.96□□□□□ -1.78
VCANP13611 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.96□□□□□ -1.78
VCANP13611 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.96□□□□□ -1.78
VCANP13611 AL360157.1-201ENST00000565962 87 ntBASIC3.96□□□□□ -1.78
VCANP13611 LARP7P3-201ENST00000579888 337 ntBASIC3.96□□□□□ -1.78
VCANP13611 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.95□□□□□ -1.78
VCANP13611 AL592182.3-201ENST00000642132 3304 ntBASIC3.95□□□□□ -1.78
VCANP13611 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.95□□□□□ -1.78
VCANP13611 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
VCANP13611 AL136360.1-201ENST00000503377 1900 ntBASIC3.95□□□□□ -1.78
VCANP13611 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 MIR504-201ENST00000385065 83 ntBASIC3.95□□□□□ -1.78
VCANP13611 SNORD96B-201ENST00000386148 79 ntBASIC3.95□□□□□ -1.78
VCANP13611 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.95□□□□□ -1.78
VCANP13611 AC135001.1-201ENST00000544546 283 ntBASIC3.95□□□□□ -1.78
VCANP13611 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VCANP13611 AL669831.5-218ENST00000591702 1873 ntBASIC3.95□□□□□ -1.78
VCANP13611 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 AL133268.1-201ENST00000405676 1401 ntBASIC3.95□□□□□ -1.78
VCANP13611 MFSD8-242ENST00000641690 4199 ntBASIC3.95□□□□□ -1.78
VCANP13611 AL034403.1-201ENST00000399414 885 ntBASIC3.95□□□□□ -1.78
VCANP13611 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.95□□□□□ -1.78
VCANP13611 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.95□□□□□ -1.78
VCANP13611 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.95□□□□□ -1.78
VCANP13611 MIR5186-201ENST00000577504 120 ntBASIC3.95□□□□□ -1.78
VCANP13611 AC107993.1-201ENST00000591343 684 ntBASIC3.95□□□□□ -1.78
VCANP13611 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VCANP13611 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VCANP13611 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.94□□□□□ -1.78
VCANP13611 AL139413.1-201ENST00000421309 217 ntBASIC3.94□□□□□ -1.78
VCANP13611 RPL23AP37-201ENST00000479658 549 ntBASIC3.94□□□□□ -1.78
VCANP13611 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
VCANP13611 AL163642.2-201ENST00000604722 1019 ntBASIC3.94□□□□□ -1.78
VCANP13611 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VCANP13611 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VCANP13611 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
VCANP13611 AC125257.1-201ENST00000560400 2930 ntBASIC3.94□□□□□ -1.78
VCANP13611 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.94□□□□□ -1.78
VCANP13611 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.94□□□□□ -1.78
VCANP13611 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VCANP13611 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VCANP13611 AC234772.1-201ENST00000377927 937 ntBASIC3.94□□□□□ -1.78
VCANP13611 RN7SKP97-201ENST00000410966 333 ntBASIC3.94□□□□□ -1.78
VCANP13611 AC093698.1-201ENST00000423843 571 ntBASIC3.94□□□□□ -1.78
VCANP13611 AC005019.1-201ENST00000436455 431 ntBASIC3.94□□□□□ -1.78
VCANP13611 AC104058.1-201ENST00000448028 297 ntBASIC3.94□□□□□ -1.78
VCANP13611 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.94□□□□□ -1.78
VCANP13611 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.94□□□□□ -1.78
VCANP13611 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC3.94□□□□□ -1.78
VCANP13611 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms