Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC021087.2-201ENST00000504656 1203 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC111000.3-201ENST00000508057 576 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.54□□□□□ -1.68
CD48P09326 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.54□□□□□ -1.68
CD48P09326 AC108043.1-201ENST00000512696 574 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CD48P09326 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.54□□□□□ -1.68
CD48P09326 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.54□□□□□ -1.68
CD48P09326 AC104115.2-201ENST00000523026 687 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.54□□□□□ -1.68
CD48P09326 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.54□□□□□ -1.68
CD48P09326 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.54□□□□□ -1.68
CD48P09326 OR5BC1P-201ENST00000529327 739 ntBASIC4.54□□□□□ -1.68
CD48P09326 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.54□□□□□ -1.68
CD48P09326 AC137768.1-201ENST00000549998 553 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC063949.1-201ENST00000552900 865 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC025918.2-201ENST00000558683 763 ntBASIC4.54□□□□□ -1.68
CD48P09326 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD48P09326 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.54□□□□□ -1.68
CD48P09326 RN7SL339P-201ENST00000580597 296 ntBASIC4.54□□□□□ -1.68
CD48P09326 RPL12P25-202ENST00000598100 674 ntBASIC4.54□□□□□ -1.68
CD48P09326 AL139395.1-201ENST00000603662 160 ntBASIC4.54□□□□□ -1.68
CD48P09326 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
CD48P09326 AL354984.3-201ENST00000604803 325 ntBASIC4.54□□□□□ -1.68
CD48P09326 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD48P09326 AC007546.1-201ENST00000619452 559 ntBASIC4.54□□□□□ -1.68
CD48P09326 AP000770.2-201ENST00000623694 100 ntBASIC4.54□□□□□ -1.68
CD48P09326 AC097520.1-201ENST00000624435 385 ntBASIC4.54□□□□□ -1.68
CD48P09326 FRG1DP-201ENST00000635586 771 ntBASIC4.54□□□□□ -1.68
CD48P09326 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.54□□□□□ -1.68
CD48P09326 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD48P09326 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD48P09326 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD48P09326 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD48P09326 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD48P09326 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CD48P09326 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
CD48P09326 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 MIR3065-201ENST00000390137 79 ntBASIC4.53□□□□□ -1.68
CD48P09326 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.53□□□□□ -1.68
CD48P09326 BTF3P9-201ENST00000418784 283 ntBASIC4.53□□□□□ -1.68
CD48P09326 MTND4LP13-201ENST00000425022 298 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 PTP4A1P3-201ENST00000433661 420 ntBASIC4.53□□□□□ -1.68
CD48P09326 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 AL772161.1-201ENST00000439130 476 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC004854.1-201ENST00000440356 349 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 RPL7P22-201ENST00000466005 733 ntBASIC4.53□□□□□ -1.68
CD48P09326 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.53□□□□□ -1.68
CD48P09326 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 SUMO1P1-201ENST00000497904 306 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC138409.2-202ENST00000507274 458 ntBASIC4.53□□□□□ -1.68
CD48P09326 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 MTND2P32-201ENST00000521584 1038 ntBASIC4.53□□□□□ -1.68
CD48P09326 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.53□□□□□ -1.68
CD48P09326 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 DYNLL1P4-201ENST00000549314 266 ntBASIC4.53□□□□□ -1.68
CD48P09326 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.53□□□□□ -1.68
CD48P09326 AC068831.4-201ENST00000556118 109 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 AP005119.2-201ENST00000579735 1105 ntBASIC4.53□□□□□ -1.68
CD48P09326 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.53□□□□□ -1.68
CD48P09326 AC079880.2-201ENST00000603790 1213 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC079587.1-201ENST00000603846 277 ntBASIC4.53□□□□□ -1.68
CD48P09326 AC013244.3-201ENST00000605614 388 ntBASIC4.53□□□□□ -1.68
CD48P09326 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.53□□□□□ -1.68
CD48P09326 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
CD48P09326 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 FP325313.1-201ENST00000638228 703 ntBASIC4.53□□□□□ -1.68
CD48P09326 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.53□□□□□ -1.68
CD48P09326 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD48P09326 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.53□□□□□ -1.68
CD48P09326 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD48P09326 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD48P09326 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CD48P09326 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD48P09326 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CD48P09326 MIR331-201ENST00000362302 94 ntBASIC4.52□□□□□ -1.69
CD48P09326 MIR129-1-201ENST00000384972 72 ntBASIC4.52□□□□□ -1.69
CD48P09326 SNORD66.1-201ENST00000391230 76 ntBASIC4.52□□□□□ -1.69
CD48P09326 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CD48P09326 TAF9BP2-201ENST00000400856 499 ntBASIC4.52□□□□□ -1.69
CD48P09326 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.52□□□□□ -1.69
CD48P09326 AL445213.1-201ENST00000412589 747 ntBASIC4.52□□□□□ -1.69
CD48P09326 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
CD48P09326 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.52□□□□□ -1.69
CD48P09326 AC114973.1-201ENST00000429057 632 ntBASIC4.52□□□□□ -1.69
CD48P09326 DYNLL1P7-201ENST00000429273 258 ntBASIC4.52□□□□□ -1.69
CD48P09326 AC069285.2-201ENST00000440210 275 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms