Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 MTCO1P35-201ENST00000515270 228 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC008126.1-201ENST00000549019 480 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC091516.1-201ENST00000549191 703 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 SULT1C2P2-201ENST00000562517 294 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AC096553.1-201ENST00000605169 829 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.04□□□□□ -1.76
HLA-DQB2P05538 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.04□□□□□ -1.76
HLA-DQB2P05538 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 SPRR2C-201ENST00000290702 219 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 ATP5F1P2-201ENST00000398143 760 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 JKAMPP1-201ENST00000413804 919 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 PTP4A1P1-201ENST00000420539 515 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 YY1P1-201ENST00000427625 668 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 HIGD1AP4-201ENST00000430194 280 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC083863.1-201ENST00000438811 231 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC006326.1-201ENST00000445465 787 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 RPL5P32-201ENST00000454085 879 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 RNA5SP179-201ENST00000517284 121 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 YPEL5P3-201ENST00000547227 352 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 PARP1P2-201ENST00000556806 195 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC136624.4-201ENST00000573044 370 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AL139395.1-201ENST00000603662 160 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC133552.5-201ENST00000604266 540 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC091167.4-201ENST00000605079 184 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AL591424.2-201ENST00000617023 128 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 AL606537.1-201ENST00000607258 2011 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 KPNA2P2-201ENST00000419546 1489 ntBASIC4.03□□□□□ -1.76
HLA-DQB2P05538 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HLA-DQB2P05538 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
HLA-DQB2P05538 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC087190.4-201ENST00000574616 8334 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 RN7SKP224-201ENST00000364140 325 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 SNORA68.2-201ENST00000391263 128 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 RAB28P1-201ENST00000411517 641 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 RPL7AP73-201ENST00000413490 353 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 RPS27AP12-201ENST00000429552 465 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC239798.3-201ENST00000454459 408 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 SEPT14P1-201ENST00000458703 648 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 RPL7P24-201ENST00000493052 752 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC139783.2-201ENST00000504847 1145 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 FTH1P21-201ENST00000512179 511 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 HNRNPKP5-201ENST00000515300 253 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 IGKV2D-10-201ENST00000520194 281 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC087369.1-201ENST00000520775 996 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC107918.3-201ENST00000533272 382 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC233309.1-201ENST00000619522 751 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 CR382285.2-201ENST00000624662 1495 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC005332.5-201ENST00000591222 2919 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 AC068254.2-201ENST00000623938 3577 ntBASIC4.02□□□□□ -1.77
HLA-DQB2P05538 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DQB2P05538 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DQB2P05538 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms