Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 MTND5P23-201ENST00000430812 1655 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 RNU5B-1-201ENST00000363286 116 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 RNU6-906P-201ENST00000384700 70 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 SNRPFP1-201ENST00000414761 252 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC093578.1-201ENST00000415219 368 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC005005.2-201ENST00000420779 380 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC091390.3-201ENST00000426478 338 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 RPL7P2-201ENST00000427639 268 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC005189.1-201ENST00000431286 310 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC092162.1-201ENST00000432828 434 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AL096803.2-201ENST00000450032 677 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 snoU13.29-201ENST00000459370 104 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 NPM1P41-201ENST00000512920 831 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 UBTFL10-201ENST00000528532 562 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.88□□□□□ -1.31
RAPGEF3O95398 AL049870.4-201ENST00000555741 486 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC090515.3-201ENST00000560431 315 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC245036.5-201ENST00000596330 847 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC113403.1-201ENST00000604910 193 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC007786.3-201ENST00000615154 596 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC104985.3-201ENST00000623479 597 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 AC012442.3-202ENST00000636742 206 ntBASIC6.88□□□□□ -1.31
RAPGEF3O95398 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RAPGEF3O95398 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC093297.3-201ENST00000607056 2517 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC135352.1-201ENST00000506173 1418 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL355578.1-201ENST00000607405 1328 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 MIR331-201ENST00000362302 94 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 RNA5SP513-201ENST00000364648 118 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL451142.1-201ENST00000375867 775 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC107081.1-201ENST00000414975 361 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC234781.4-201ENST00000419384 244 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC007389.2-201ENST00000434630 306 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC000041.1-201ENST00000439655 175 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC093166.2-201ENST00000455969 1017 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 RPL6P9-201ENST00000466502 859 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC025459.1-201ENST00000504072 156 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL583832.1-201ENST00000603227 784 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC079610.2-201ENST00000604818 690 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 OR8G7P-201ENST00000616658 848 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC006386.1-201ENST00000619436 415 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC011330.2-201ENST00000621680 635 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC011815.3-201ENST00000624194 473 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.87□□□□□ -1.31
RAPGEF3O95398 CU459211.1-201ENST00000635667 749 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 AC004817.4-201ENST00000602396 3625 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RAPGEF3O95398 AL158163.1-201ENST00000603915 1649 ntBASIC6.87□□□□□ -1.31
RAPGEF3O95398 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 AC099786.3-201ENST00000565735 1410 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RAPGEF3O95398 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 RNU6-236P-201ENST00000363886 106 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 RNU4-28P-201ENST00000364739 141 ntBASIC6.86□□□□□ -1.31
RAPGEF3O95398 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RAPGEF3O95398 SDHCP2-201ENST00000398565 501 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms