Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC011998.1-201ENST00000433403 117 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AL132765.1-201ENST00000434165 553 ntBASIC3.84□□□□□ -1.79
SGCEO43556 UBE2V2P1-201ENST00000434717 398 ntBASIC3.84□□□□□ -1.79
SGCEO43556 BTG3P1-201ENST00000435859 716 ntBASIC3.84□□□□□ -1.79
SGCEO43556 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 MTCO3P17-201ENST00000443775 513 ntBASIC3.84□□□□□ -1.79
SGCEO43556 EXTL2P1-201ENST00000446218 416 ntBASIC3.84□□□□□ -1.79
SGCEO43556 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 MTND2P28-201ENST00000457540 1044 ntBASIC3.84□□□□□ -1.79
SGCEO43556 STRADBP1-201ENST00000478954 1281 ntBASIC3.84□□□□□ -1.79
SGCEO43556 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AC111000.3-201ENST00000508057 576 ntBASIC3.84□□□□□ -1.79
SGCEO43556 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.84□□□□□ -1.79
SGCEO43556 ATP1B1P1-201ENST00000509767 915 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SGCEO43556 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.84□□□□□ -1.79
SGCEO43556 AC008694.2-201ENST00000517591 306 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.84□□□□□ -1.79
SGCEO43556 BMS1P7-201ENST00000602440 1052 ntBASIC3.84□□□□□ -1.79
SGCEO43556 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 AC012409.3-201ENST00000611343 981 ntBASIC3.84□□□□□ -1.79
SGCEO43556 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
SGCEO43556 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SGCEO43556 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SGCEO43556 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SGCEO43556 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SGCEO43556 AC017002.4-201ENST00000604721 1525 ntBASIC3.84□□□□□ -1.8
SGCEO43556 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SGCEO43556 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SGCEO43556 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SGCEO43556 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SGCEO43556 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.84□□□□□ -1.8
SGCEO43556 AC018555.1-201ENST00000567548 1980 ntBASIC3.83□□□□□ -1.8
SGCEO43556 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 AC067945.1-201ENST00000342609 618 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RNU1-130P-201ENST00000363930 160 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RNU6-398P-201ENST00000384143 109 ntBASIC3.83□□□□□ -1.8
SGCEO43556 MIR192-201ENST00000384915 110 ntBASIC3.83□□□□□ -1.8
SGCEO43556 MIR129-1-201ENST00000384972 72 ntBASIC3.83□□□□□ -1.8
SGCEO43556 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 MIR1911-201ENST00000410783 80 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RPEP3-201ENST00000425462 676 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.83□□□□□ -1.8
SGCEO43556 AL138878.2-201ENST00000440581 1241 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AL645939.1-201ENST00000453429 797 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RPL21P71-201ENST00000465598 459 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC010683.1-201ENST00000473673 378 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.83□□□□□ -1.8
SGCEO43556 RPS26P15-201ENST00000488067 348 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AK3P4-201ENST00000504283 583 ntBASIC3.83□□□□□ -1.8
SGCEO43556 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 CCNHP1-201ENST00000513311 678 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 IFITM8P-201ENST00000522529 394 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC022616.2-201ENST00000523185 300 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 OR5AN2P-201ENST00000534535 896 ntBASIC3.83□□□□□ -1.8
SGCEO43556 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.83□□□□□ -1.8
SGCEO43556 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.83□□□□□ -1.8
SGCEO43556 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 AC007448.1-201ENST00000582714 234 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.83□□□□□ -1.8
SGCEO43556 AC020915.5-201ENST00000596836 964 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RPL12P25-202ENST00000598100 674 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC079587.1-201ENST00000603846 277 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC116651.1-201ENST00000609724 556 ntBASIC3.83□□□□□ -1.8
SGCEO43556 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 AC017007.4-201ENST00000503353 1352 ntBASIC3.83□□□□□ -1.8
SGCEO43556 AC012618.3-205ENST00000637896 1496 ntBASIC3.83□□□□□ -1.8
SGCEO43556 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 AL118496.1-201ENST00000440201 1812 ntBASIC3.83□□□□□ -1.8
SGCEO43556 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SGCEO43556 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.83□□□□□ -1.8
SGCEO43556 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.83□□□□□ -1.8
SGCEO43556 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCEO43556 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SGCEO43556 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SGCEO43556 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.82□□□□□ -1.8
SGCEO43556 AL132640.2-201ENST00000559968 1698 ntBASIC3.82□□□□□ -1.8
SGCEO43556 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SGCEO43556 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms