Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CDY14P-201ENST00000431260 1014 ntBASIC4.5□□□□□ -1.69
TO15178 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.5□□□□□ -1.69
TO15178 CDY12P-201ENST00000440679 1015 ntBASIC4.5□□□□□ -1.69
TO15178 AC002542.1-201ENST00000440683 193 ntBASIC4.5□□□□□ -1.69
TO15178 CDY13P-201ENST00000445813 1015 ntBASIC4.5□□□□□ -1.69
TO15178 AL031584.1-201ENST00000447169 754 ntBASIC4.5□□□□□ -1.69
TO15178 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TO15178 CDY23P-201ENST00000451661 1014 ntBASIC4.5□□□□□ -1.69
TO15178 RPL7P32-201ENST00000457119 744 ntBASIC4.5□□□□□ -1.69
TO15178 RPL32P9-201ENST00000487963 407 ntBASIC4.5□□□□□ -1.69
TO15178 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.5□□□□□ -1.69
TO15178 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.5□□□□□ -1.69
TO15178 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.5□□□□□ -1.69
TO15178 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.5□□□□□ -1.69
TO15178 RN7SKP46-201ENST00000515942 234 ntBASIC4.5□□□□□ -1.69
TO15178 AC021451.1-201ENST00000523498 1129 ntBASIC4.5□□□□□ -1.69
TO15178 AP001922.4-201ENST00000526967 290 ntBASIC4.5□□□□□ -1.69
TO15178 AC005868.1-201ENST00000536421 331 ntBASIC4.5□□□□□ -1.69
TO15178 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.5□□□□□ -1.69
TO15178 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.5□□□□□ -1.69
TO15178 PCNPP1-201ENST00000552501 511 ntBASIC4.5□□□□□ -1.69
TO15178 AC051619.2-201ENST00000559063 397 ntBASIC4.5□□□□□ -1.69
TO15178 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.5□□□□□ -1.69
TO15178 MIR4458-201ENST00000578872 75 ntBASIC4.5□□□□□ -1.69
TO15178 AP005119.2-201ENST00000579735 1105 ntBASIC4.5□□□□□ -1.69
TO15178 SNORA74C-1-201ENST00000580726 201 ntBASIC4.5□□□□□ -1.69
TO15178 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.5□□□□□ -1.69
TO15178 EIF1P6-201ENST00000600054 334 ntBASIC4.5□□□□□ -1.69
TO15178 AL022067.1-201ENST00000602426 454 ntBASIC4.5□□□□□ -1.69
TO15178 AC011453.2-201ENST00000603737 729 ntBASIC4.5□□□□□ -1.69
TO15178 Z82195.1-201ENST00000604558 398 ntBASIC4.5□□□□□ -1.69
TO15178 AC006946.3-201ENST00000609791 756 ntBASIC4.5□□□□□ -1.69
TO15178 AC007497.1-201ENST00000610421 561 ntBASIC4.5□□□□□ -1.69
TO15178 AC090510.2-201ENST00000617465 629 ntBASIC4.5□□□□□ -1.69
TO15178 AC087385.3-201ENST00000620477 187 ntBASIC4.5□□□□□ -1.69
TO15178 AL590396.4-201ENST00000636779 956 ntBASIC4.5□□□□□ -1.69
TO15178 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TO15178 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.5□□□□□ -1.69
TO15178 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TO15178 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.5□□□□□ -1.69
TO15178 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
TO15178 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
TO15178 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TO15178 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
TO15178 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TO15178 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.49□□□□□ -1.69
TO15178 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TO15178 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
TO15178 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
TO15178 NSRP1P1-201ENST00000444067 1693 ntBASIC4.49□□□□□ -1.69
TO15178 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 RN7SKP149-201ENST00000363008 344 ntBASIC4.49□□□□□ -1.69
TO15178 RNU6-1339P-201ENST00000363574 91 ntBASIC4.49□□□□□ -1.69
TO15178 SNORA58B-201ENST00000364259 136 ntBASIC4.49□□□□□ -1.69
TO15178 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 OR52E6-202ENST00000379946 954 ntBASIC4.49□□□□□ -1.69
TO15178 MIR525-201ENST00000384978 85 ntBASIC4.49□□□□□ -1.69
TO15178 AL450992.3-201ENST00000413192 568 ntBASIC4.49□□□□□ -1.69
TO15178 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 MTND4P11-201ENST00000417020 1058 ntBASIC4.49□□□□□ -1.69
TO15178 SFR1P2-201ENST00000421841 730 ntBASIC4.49□□□□□ -1.69
TO15178 AC007394.1-201ENST00000421941 531 ntBASIC4.49□□□□□ -1.69
TO15178 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
TO15178 YWHAEP5-201ENST00000431545 765 ntBASIC4.49□□□□□ -1.69
TO15178 PPIAP13-201ENST00000434706 478 ntBASIC4.49□□□□□ -1.69
TO15178 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 AL592437.1-201ENST00000443781 492 ntBASIC4.49□□□□□ -1.69
TO15178 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.49□□□□□ -1.69
TO15178 EEF1A1P1-201ENST00000447052 739 ntBASIC4.49□□□□□ -1.69
TO15178 AL050341.1-201ENST00000447743 313 ntBASIC4.49□□□□□ -1.69
TO15178 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.49□□□□□ -1.69
TO15178 OR52J1P-201ENST00000450596 932 ntBASIC4.49□□□□□ -1.69
TO15178 TPMTP4-201ENST00000450749 678 ntBASIC4.49□□□□□ -1.69
TO15178 RPL7P61-201ENST00000451721 751 ntBASIC4.49□□□□□ -1.69
TO15178 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.49□□□□□ -1.69
TO15178 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 snoU13.20-201ENST00000459180 104 ntBASIC4.49□□□□□ -1.69
TO15178 AL161747.1-201ENST00000480068 358 ntBASIC4.49□□□□□ -1.69
TO15178 AC093270.2-201ENST00000486157 792 ntBASIC4.49□□□□□ -1.69
TO15178 RN7SL558P-201ENST00000497468 299 ntBASIC4.49□□□□□ -1.69
TO15178 GTF2IP9-201ENST00000502460 301 ntBASIC4.49□□□□□ -1.69
TO15178 NDUFA5P12-201ENST00000503796 343 ntBASIC4.49□□□□□ -1.69
TO15178 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.49□□□□□ -1.69
TO15178 MORF4L1P3-201ENST00000525966 950 ntBASIC4.49□□□□□ -1.69
TO15178 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.49□□□□□ -1.69
TO15178 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.49□□□□□ -1.69
TO15178 AC063949.1-201ENST00000552900 865 ntBASIC4.49□□□□□ -1.69
TO15178 ZNF971P-201ENST00000562068 1249 ntBASIC4.49□□□□□ -1.69
TO15178 AC009117.1-201ENST00000563948 554 ntBASIC4.49□□□□□ -1.69
TO15178 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms