Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 RNU6-984P-201ENST00000363236 109 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 U3.22-201ENST00000391120 215 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 MIR937-201ENST00000401271 86 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 EIF4A1P3-201ENST00000411521 244 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 RPL23AP38-201ENST00000423801 469 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 AL732292.1-201ENST00000426692 226 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.41□□□□□ -1.86
SDCBPO00560 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 CEACAMP9-201ENST00000442990 513 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 CYCSP42-201ENST00000450823 238 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC108475.1-201ENST00000507880 950 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SDCBPO00560 RN7SKP34-201ENST00000516142 244 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 OR7E10P-201ENST00000526420 991 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.41□□□□□ -1.86
SDCBPO00560 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.41□□□□□ -1.86
SDCBPO00560 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC068790.4-201ENST00000602474 263 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 AL161729.3-201ENST00000603533 673 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AL158062.1-201ENST00000619632 745 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 AP000843.1-201ENST00000624880 701 ntBASIC3.41□□□□□ -1.86
SDCBPO00560 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.41□□□□□ -1.86
SDCBPO00560 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SDCBPO00560 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SDCBPO00560 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SDCBPO00560 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SDCBPO00560 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.4□□□□□ -1.86
SDCBPO00560 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.4□□□□□ -1.86
SDCBPO00560 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.4□□□□□ -1.86
SDCBPO00560 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SDCBPO00560 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SDCBPO00560 MIR383-201ENST00000362257 73 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 RNU4-39P-201ENST00000362455 127 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 RNA5SP366-201ENST00000365454 123 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 RPL23AP26-201ENST00000412728 464 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC006011.1-201ENST00000442758 349 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.4□□□□□ -1.87
SDCBPO00560 SBDSP1-204ENST00000453858 737 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC105918.1-201ENST00000474399 838 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC146944.2-203ENST00000502493 354 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC083829.1-201ENST00000503756 657 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC106806.2-201ENST00000509365 500 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC139495.1-202ENST00000513164 354 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 MIR2114-201ENST00000516645 80 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 MTND1P6-201ENST00000523621 946 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 DUX4L52-201ENST00000549363 777 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.4□□□□□ -1.87
SDCBPO00560 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.4□□□□□ -1.87
SDCBPO00560 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 CD24P2-201ENST00000565486 219 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC122134.1-201ENST00000565664 1104 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SDCBPO00560 AC025946.2-201ENST00000603398 234 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC114781.5-201ENST00000615297 108 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.4□□□□□ -1.87
SDCBPO00560 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
SDCBPO00560 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.4□□□□□ -1.87
SDCBPO00560 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.4□□□□□ -1.87
SDCBPO00560 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.87
SDCBPO00560 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SDCBPO00560 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SDCBPO00560 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.4□□□□□ -1.87
SDCBPO00560 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SDCBPO00560 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.39□□□□□ -1.87
SDCBPO00560 IPO8P1-201ENST00000455509 3109 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 AC116667.1-201ENST00000604855 2072 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.39□□□□□ -1.87
SDCBPO00560 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SDCBPO00560 NPM1P34-201ENST00000428821 893 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AC023141.6-201ENST00000429418 337 ntBASIC3.39□□□□□ -1.87
SDCBPO00560 AL358472.1-201ENST00000431295 329 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms