Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXN3O00409 AADACP1-206ENST00000561502 1193 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXN3O00409 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC011447.4-201ENST00000587562 111 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC123786.2-201ENST00000603459 275 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AL390816.3-201ENST00000604527 1066 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 AC025263.3-201ENST00000622965 1396 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
FOXN3O00409 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FOXN3O00409 AC090017.1-201ENST00000548612 1779 ntBASIC5.37□□□□□ -1.55
FOXN3O00409 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXN3O00409 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 SCARNA15-201ENST00000607520 4325 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXN3O00409 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXN3O00409 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXN3O00409 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXN3O00409 SNURFL-201ENST00000309296 343 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 RPL23P2-201ENST00000320371 421 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXN3O00409 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC005522.1-201ENST00000395416 346 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AL008987.1-201ENST00000415528 237 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 HMGB1P49-201ENST00000418882 569 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 GTF2IP23-201ENST00000423746 351 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 HIGD1AP4-201ENST00000430194 280 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FOXN3O00409 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXN3O00409 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.36□□□□□ -1.55
FOXN3O00409 NECAP1P2-201ENST00000455668 727 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AC093166.2-201ENST00000455969 1017 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 RN7SL799P-201ENST00000475891 298 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 HIGD1AP14-201ENST00000507617 282 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 RPL7L1P13-201ENST00000511702 739 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXN3O00409 AP001636.2-201ENST00000525517 696 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC005868.1-201ENST00000536421 331 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
FOXN3O00409 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 AC114878.2-201ENST00000604863 1251 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AC105227.2-201ENST00000615075 605 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AC009704.2-201ENST00000618739 483 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 MTND4P8-201ENST00000514997 1362 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
FOXN3O00409 AL451142.2-201ENST00000429076 2090 ntBASIC5.36□□□□□ -1.55
FOXN3O00409 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
FOXN3O00409 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
FOXN3O00409 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 AL672167.1-204ENST00000641875 3017 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AP005901.5-201ENST00000545779 1796 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXN3O00409 SNORA51.12-201ENST00000384448 134 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 FCF1P5-201ENST00000406490 482 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 GSTM3P2-201ENST00000412746 530 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 PAICSP7-201ENST00000419829 962 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 RPS26P40-201ENST00000435209 294 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 RHOT1P3-201ENST00000436571 331 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC092013.1-201ENST00000438795 332 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 MTCYBP31-201ENST00000438855 1122 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.35□□□□□ -1.55
FOXN3O00409 FGF7P5-201ENST00000441829 291 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AL354714.3-201ENST00000447284 493 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC007327.1-201ENST00000447461 264 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 RPS27P23-201ENST00000487608 251 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC011352.3-201ENST00000505162 593 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.35□□□□□ -1.55
FOXN3O00409 RNA5SP92-201ENST00000516437 110 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXN3O00409 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
FOXN3O00409 UBTFL10-201ENST00000528532 562 ntBASIC5.35□□□□□ -1.55
FOXN3O00409 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXN3O00409 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXN3O00409 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.35□□□□□ -1.55
FOXN3O00409 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms