Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC188H7C350 TRY2P-201ENST00000448860 689 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 OR52J1P-201ENST00000450596 932 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AL645937.3-201ENST00000453647 936 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC188H7C350 RPL21P47-201ENST00000483696 477 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC188H7C350 AC007016.1-201ENST00000512110 244 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC188H7C350 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC188H7C350 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC188H7C350 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC188H7C350 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC188H7C350 OR1AB1P-201ENST00000585564 761 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 PCNAP1-202ENST00000595299 752 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AC008638.3-201ENST00000603341 463 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 SUMO2P15-201ENST00000604285 278 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AC120053.1-201ENST00000607706 736 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC188H7C350 AC132825.7-201ENST00000638744 335 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC188H7C350 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC188H7C350 AC097504.1-201ENST00000515103 2415 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC188H7C350 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC188H7C350 AC006042.3-201ENST00000454684 1469 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CCDC188H7C350 AC008432.1-201ENST00000615912 1320 ntBASIC4.67□□□□□ -1.66
CCDC188H7C350 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC188H7C350 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC188H7C350 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC188H7C350 MAPK10-263ENST00000641052 4307 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC188H7C350 ZNF137P-201ENST00000456718 1920 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC188H7C350 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC188H7C350 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC188H7C350 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC188H7C350 RNA5SP27-201ENST00000363839 119 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 RN7SKP224-201ENST00000364140 325 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC188H7C350 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 RPL31P52-201ENST00000407532 367 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 RN7SKP273-201ENST00000411392 314 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC093162.1-201ENST00000419682 124 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 RPL12P34-201ENST00000424532 479 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC073069.1-201ENST00000428657 441 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 OR1H1P-201ENST00000448731 937 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC073850.1-201ENST00000449243 255 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC012671.1-201ENST00000451912 203 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 SBDSP1-204ENST00000453858 737 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AL035407.2-201ENST00000454090 378 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 RWDD4P1-201ENST00000488019 565 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 PPM1AP1-201ENST00000502740 1135 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC016550.1-201ENST00000505348 785 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
CCDC188H7C350 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 RNA5SP360-201ENST00000516555 118 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC188H7C350 CR383656.14-201ENST00000551951 406 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AL160290.3-201ENST00000604869 165 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 Z98200.1-201ENST00000607298 470 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC211433.2-201ENST00000608433 387 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 AC138907.10-201ENST00000623708 983 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC188H7C350 AL451142.2-201ENST00000429076 2090 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC188H7C350 HSPA8P19-201ENST00000505359 1517 ntBASIC4.66□□□□□ -1.66
CCDC188H7C350 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC188H7C350 AC108467.2-201ENST00000617640 1597 ntBASIC4.65□□□□□ -1.66
CCDC188H7C350 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC188H7C350 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC188H7C350 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC188H7C350 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCDC188H7C350 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC188H7C350 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC188H7C350 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CCDC188H7C350 SNORD74.4-201ENST00000364129 80 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 SNORA71.2-201ENST00000364941 134 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 RNU6-481P-201ENST00000384194 107 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 MIR105-2-201ENST00000385083 81 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 MIR513A2-201ENST00000385249 127 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AL158825.1-201ENST00000414735 521 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 ETF1P3-201ENST00000430422 1160 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 UBE2V1P6-201ENST00000430840 422 ntBASIC4.65□□□□□ -1.67
CCDC188H7C350 AC016831.4-201ENST00000438302 307 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms