Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RAD23BP3-201ENST00000454157 1152 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC112184.1-201ENST00000505179 312 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RNA5SP519-201ENST00000516480 119 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 IGLVIV-53-201ENST00000520107 367 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 TRAV8-5-201ENST00000537369 341 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC084824.1-201ENST00000550917 1005 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC067959.1-201ENST00000604334 379 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL591034.3-201ENST00000605511 685 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC012603.1-201ENST00000606424 528 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC007546.1-201ENST00000619452 559 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 NAMPTP1-201ENST00000440465 2514 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC092111.2-201ENST00000611627 1414 ntBASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.35□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SPRR2C-201ENST00000290702 219 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RNU1-14P-201ENST00000362759 152 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL161909.1-201ENST00000397390 712 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL512430.2-201ENST00000406786 339 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RN7SKP235-201ENST00000410662 305 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL391219.1-201ENST00000422570 483 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 COX6B1P7-201ENST00000430845 235 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RPL23AP46-201ENST00000438548 490 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 SYT14P1-201ENST00000481459 721 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 BNIP3P41-201ENST00000503774 571 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC025554.1-201ENST00000505641 188 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL592156.1-201ENST00000508758 304 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC027176.2-201ENST00000559166 746 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 MIR492-201ENST00000638676 116 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 AC093775.1-201ENST00000624154 1868 ntBASIC3.34□□□□□ -1.87
TCRBV4S1A1TA0A5B7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
TCRBV4S1A1TA0A5B7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.88
TCRBV4S1A1TA0A5B7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TCRBV4S1A1TA0A5B7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP515-201ENST00000364570 118 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNU1-64P-201ENST00000365443 163 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AP000357.1-201ENST00000409926 1165 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP317-201ENST00000410176 116 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RN7SKP182-201ENST00000410772 298 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP306-201ENST00000411087 107 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP311-201ENST00000411290 116 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL157831.1-201ENST00000426134 473 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 MTCYBP21-201ENST00000443300 1113 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 HSFY6P-201ENST00000445573 403 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RPL23AP81-201ENST00000455252 467 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AL133477.1-201ENST00000457472 514 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 AC093824.1-201ENST00000508796 343 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RFPL4AP3-201ENST00000515267 345 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP315-201ENST00000516340 116 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 RNA5SP312-201ENST00000517068 116 ntBASIC3.33□□□□□ -1.88
TCRBV4S1A1TA0A5B7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms