Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ELOCP6-201ENST00000429066 328 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 FAM96AP1-201ENST00000430879 482 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC128677.1-201ENST00000436016 442 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 ATP6V1E1P1-201ENST00000439215 681 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC114495.1-201ENST00000441274 436 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 ARPC3P2-201ENST00000457786 533 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 ELOCP12-201ENST00000458706 328 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC104763.1-201ENST00000475274 360 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC078918.1-201ENST00000498515 228 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC020893.1-201ENST00000502452 580 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC110775.1-201ENST00000513721 462 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC108471.1-201ENST00000513977 287 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 SNORA64.4-201ENST00000516632 81 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 CETN3-206ENST00000522864 738 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AP002004.1-206ENST00000532441 876 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC007536.1-201ENST00000533382 349 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AL163153.1-201ENST00000554223 283 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC010735.1-201ENST00000567305 1026 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC022968.1-201ENST00000567372 442 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC002310.3-201ENST00000569728 723 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AL591222.2-201ENST00000604443 754 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AL139041.1-201ENST00000605480 610 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC008115.3-201ENST00000614874 549 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC100827.5-201ENST00000615883 426 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 MIR6849-201ENST00000618543 69 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 AC019080.5-201ENST00000624891 757 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 API5P2-201ENST00000397055 1498 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 SAGE2P-201ENST00000420011 2126 ntBASIC2.05□□□□□ -2.08
LINC01558Q9Y6Z2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 MIR30E-201ENST00000362104 92 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP189-201ENST00000364920 115 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 SNORA51.4-201ENST00000364993 124 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 U3.30-201ENST00000391308 210 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RPL5P18-201ENST00000406671 891 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RNA5SP344-201ENST00000411081 104 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 DDX39BP1-205ENST00000422507 192 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC009965.2-201ENST00000425328 970 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC006989.1-201ENST00000427212 131 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC093151.1-201ENST00000427711 313 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 NPM1P24-201ENST00000428039 894 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 BX323845.3-201ENST00000428215 527 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AL049745.1-201ENST00000433953 286 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 SETP8-201ENST00000435341 628 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 SNORA71B-202ENST00000439232 272 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 VN1R48P-201ENST00000448149 1036 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RPS3AP46-201ENST00000448352 682 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC108463.1-201ENST00000450258 347 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 RPL36AP13-201ENST00000457490 317 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 NPM1P17-201ENST00000479221 602 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC012181.1-201ENST00000479895 423 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 TRBV12-2-201ENST00000489763 344 ntBASIC2.04□□□□□ -2.08
LINC01558Q9Y6Z2 AC109462.1-201ENST00000491087 368 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms