Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU5D-1-201ENST00000363299 116 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SKP224-201ENST00000364140 325 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MTND4P13-201ENST00000402078 1023 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RNA5SP80-201ENST00000410475 111 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RNA5SP296-201ENST00000410523 111 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RN7SKP273-201ENST00000411392 314 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL161449.1-201ENST00000414531 1199 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC107081.1-201ENST00000414975 361 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MTCO3P1-205ENST00000422088 832 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL139421.1-201ENST00000423010 169 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RPL30P3-201ENST00000424262 333 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093655.2-201ENST00000425735 631 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 YWHAZP8-201ENST00000436935 731 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MTND1P26-201ENST00000440488 538 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 FGF7P5-201ENST00000441829 291 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC090804.1-201ENST00000448870 490 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC234781.3-201ENST00000452540 973 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC022133.1-201ENST00000490961 571 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 NDUFB4P12-201ENST00000513465 390 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC027309.2-201ENST00000520566 192 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079171.1-201ENST00000568788 914 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC005252.1-201ENST00000604518 1063 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AC211433.2-201ENST00000608433 387 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 Z99129.2-201ENST00000619967 314 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 MTND5P31-201ENST00000419366 1374 ntBASIC5.93□□□□□ -1.46
COL4A3BPQ9Y5P4 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU6-1214P-201ENST00000363650 109 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 SNORA48.4-201ENST00000391089 134 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 RNU2-42P-201ENST00000410697 113 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AL136133.1-201ENST00000413694 376 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC006960.1-201ENST00000419980 153 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC009237.2-201ENST00000421358 284 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC234779.1-201ENST00000425910 285 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC124944.2-201ENST00000429866 1242 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC073143.1-201ENST00000436316 395 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 MTCO2P20-201ENST00000437339 673 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AL645937.3-201ENST00000453647 936 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC079168.1-201ENST00000458741 345 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC058823.1-201ENST00000485315 474 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 KLRA1P-201ENST00000503499 986 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC110792.2-201ENST00000510278 224 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 MTND3P12-201ENST00000559068 328 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 DUXAP3-201ENST00000603616 594 ntBASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.92□□□□□ -1.46
COL4A3BPQ9Y5P4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms